RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 ACRBPQ8NEB7 543 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 SLC39A13Q96H72 371 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 FCRL2Q96LA5 508 aaPredicted RBP16.66■□□□□ 0.26
CLN6-216ENST00000636876 PPP1R9BQ96SB3 815 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 CNPY3Q9BT09 278 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 TRIM7Q9C029 511 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 DCLK3Q9C098 648 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 UVRAGQ9P2Y5 699 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 LSM7Q9UK45 103 aaKnown RBP16.66■□□□□ 0.26
CLN6-216ENST00000636876 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
CLN6-216ENST00000636876 SYNJ2BP-COX16A0A087WUM0 186 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 GREM1O60565 184 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 F9P00740 461 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 PSMC3P17980 439 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 KRT83P78385 493 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 ATP11AP98196 1134 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 OGDHQ02218 1023 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 DEUP1Q05D60 604 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 FCHO2Q0JRZ9 810 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 NME3Q13232 169 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 GRM2Q14416 872 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 C15orf59Q2T9L4 293 aaPredicted RBP16.65■□□□□ 0.26
CLN6-216ENST00000636876 HTR3DQ70Z44 454 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 BNIPLQ7Z465 357 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 YAF2Q8IY57 180 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 SLC44A3Q8N4M1 653 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 ZNF564Q8TBZ8 553 aaPredicted RBP16.65■□□□□ 0.26
CLN6-216ENST00000636876 FNIP1Q8TF40 1166 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 RFFLQ8WZ73 363 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 DESI2Q9BSY9 194 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 TMEM51Q9NW97 253 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 THG1LQ9NWX6 298 aaKnown RBP16.65■□□□□ 0.26
CLN6-216ENST00000636876 COX16Q9P0S2 106 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 CALCOCO1Q9P1Z2 691 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 CTTNBP2NLQ9P2B4 639 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 TRIOO75962 3097 aa16.65■□□□□ 0.26
CLN6-216ENST00000636876 KIF26AQ9ULI4 1882 aaPredicted RBP16.65■□□□□ 0.26
CLN6-216ENST00000636876 SCAMP3O14828 347 aaKnown RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 CCP110O43303 1012 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 ENDOD1O94919 500 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 KLKB1P03952 638 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 CORO1AP31146 461 aaKnown RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 RDXP35241 583 aaKnown RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 HARS2P49590 506 aaKnown RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 CXCR3P49682 368 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 ZNF252P-AS1Q0IIN9 211 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 ARHGAP29Q52LW3 1261 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 ZC3H12AQ5D1E8 599 aaKnown RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 NUGGCQ68CJ6 796 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 CC2D1AQ6P1N0 951 aaPredicted RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 Q6ZNB5 142 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 STRADAQ7RTN6 431 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 UNC45BQ8IWX7 931 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 RHOT2Q8IXI1 618 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 GJD3Q8N144 294 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 CENPIQ92674 756 aaPredicted RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 TRMT61BQ9BVS5 477 aaKnown RBP16.64■□□□□ 0.25
CLN6-216ENST00000636876 PIGVQ9NUD9 493 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 ANAPC7Q9UJX3 599 aa16.64■□□□□ 0.25
CLN6-216ENST00000636876 RCCD1A6NED2 376 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 SLC9A3R1O14745 358 aaPredicted RBP16.63■□□□□ 0.25
CLN6-216ENST00000636876 CHADO15335 359 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 MTA2O94776 668 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 APOEP02649 317 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 SLC2A3P11169 496 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 DESP17661 470 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 PSMA2P25787 234 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 GDI1P31150 447 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 CCR1P32246 355 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 VAV2P52735 878 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 TDGQ13569 410 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 PPP2R5DQ14738 602 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 TCEAL1Q15170 157 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 CDO1Q16878 200 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 SH3PXD2AQ5TCZ1 1133 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 SND1Q7KZF4 910 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLN6-216ENST00000636876 KIAA1328Q86T90 577 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 RNF135Q8IUD6 432 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 SLC35G2Q8TBE7 412 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 FAM172AQ8WUF8 416 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 RNF34Q969K3 372 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 ASIC4Q96FT7 647 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 CD320Q9NPF0 282 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.63■□□□□ 0.25
CLN6-216ENST00000636876 DUS2Q9NX74 493 aaKnown RBP16.63■□□□□ 0.25
CLN6-216ENST00000636876 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 TFR2Q9UP52 801 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 ZNF510Q9Y2H8 683 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 ADGRG1Q9Y653 693 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 WNT6Q9Y6F9 365 aa16.63■□□□□ 0.25
CLN6-216ENST00000636876 PJA2O43164 708 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 LATS1O95835 1130 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 IFNAR2P48551 515 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 ATXN1P54253 815 aaKnown RBP16.62■□□□□ 0.25
CLN6-216ENST00000636876 HDAC4P56524 1084 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 PDGFRLQ15198 375 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 RAB6CQ53S08 254 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 BRMS1LQ5PSV4 323 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 DENND1CQ8IV53 801 aa16.62■□□□□ 0.25
CLN6-216ENST00000636876 BBS7Q8IWZ6 715 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms