RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ADSSL1Q8N142 457 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TMEM132CQ8N3T6 1108 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 MYLPFQ96A32 169 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PARK7Q99497 189 aaKnown RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 GPER1Q99527 375 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ILKAPQ9H0C8 392 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 AMACRQ9UHK6 382 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PFDN2Q9UHV9 154 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 MRC2Q9UBG0 1479 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 SGTAO43765 313 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 MED24O75448 989 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TNFAIP8O95379 198 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PTPN6P29350 595 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PNPLA4P41247 253 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 GPR15P49685 360 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 MAGOHP61326 146 aaKnown RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF200P98182 395 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TRAF2Q12933 501 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 FAM76BQ5HYJ3 339 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PAGE2BQ5JRK9 111 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 C10orf120Q5SQS8 335 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 BICRALQ6AI39 1079 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PIK3C3Q8NEB9 887 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 HEXDCQ8WVB3 486 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 DCTPP1Q9H773 170 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 SOHLH2Q9NX45 425 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 KIAA1257Q9ULG3 409 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 GRID1Q9ULK0 1009 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TNKSO95271 1327 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 CLRN2A0PK11 232 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 F5H5T6 163 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 STAU1O95793 577 aaKnown RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 GIMD1P0DJR0 217 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 IRF1P10914 325 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 FGFR2P21802 821 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PTPN7P35236 360 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 RENBPP51606 427 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 SMIM11AP58511 58 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 FAM98CQ17RN3 349 aaKnown RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 FAM98BQ52LJ0 330 aaKnown RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 STOX1Q6ZVD7 989 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TMEM179Q6ZVK1 233 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 OAFQ86UD1 273 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 OR6J1Q8NGC5 347 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 HASPINQ8TF76 798 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ARHGEF4Q9NR80 690 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 AASDHPPTQ9NRN7 309 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 FBXO28Q9NVF7 368 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PCDH10Q9P2E7 1040 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 CCDC163A0A0D9SF12 145 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 SNCGO76070 127 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 MICAL2O94851 1124 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TFRCP02786 760 aaKnown RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PRH1P02810 166 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ANXA1P04083 346 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 MYL9P24844 172 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PTX3P26022 381 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 NTSP30990 170 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 PIK3CGP48736 1102 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 EPHB3P54753 998 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 TPTEP56180 551 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ACTN3Q08043 901 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 DPYSQ14117 519 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 BRSK2Q8IWQ3 736 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ZNF786Q8N393 782 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 GALNT4Q8N4A0 578 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 POC1BQ8TC44 478 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 C12orf66Q96MD2 445 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 NSMCE2Q96MF7 247 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 HIST1H2AAQ96QV6 131 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 AP1M1Q9BXS5 423 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ABCG4Q9H172 646 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 JPH1Q9HDC5 661 aaPredicted RBP6.16□□□□□ -1.42
SCN1A-212ENST00000636194 DUSP12Q9UNI6 340 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ST3GAL5Q9UNP4 418 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ADGRG1Q9Y653 693 aa6.16□□□□□ -1.42
SCN1A-212ENST00000636194 ADCY9O60503 1353 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 WASHC1A8K0Z3 465 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 WASH3PC4AMC7 463 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 AXIN1O15169 862 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ENTPD5O75356 428 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CSF1RP07333 972 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CHRNGP07510 517 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 RPP38P78345 283 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ABATP80404 500 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 PCSK7Q16549 785 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 GXYLT1Q4G148 440 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 HMBOX1Q6NT76 420 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 USP17L2Q6R6M4 530 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 WASH2PQ6VEQ5 465 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 DEF8Q6ZN54 512 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 ATG9AQ7Z3C6 839 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 SENP7Q9BQF6 1050 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 METTL8Q9H825 291 aaKnown RBP6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CYP3A43Q9HB55 503 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 VPS4AQ9UN37 437 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 CA5BQ9Y2D0 317 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 AXIN2Q9Y2T1 843 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 WDR97A6NE52 1622 aa6.15□□□□□ -1.42
SCN1A-212ENST00000636194 INSRP06213 1382 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms