RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 HOXC11O43248 304 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 DAB1O75553 588 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 TRUB2O95900 331 aaKnown RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 DCNP07585 359 aaKnown RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 CHRNB1P11230 501 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 ADH5P11766 374 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 HNRNPH3P31942 346 aaKnown RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 NOS2P35228 1153 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 OPRD1P41143 372 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 MATKP42679 507 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 GALK1P51570 392 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 CDK17Q00537 523 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 GAD2Q05329 585 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 PON2Q15165 354 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 FAM102AQ5T9C2 384 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 NAIF1Q69YI7 327 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 ACAD10Q6JQN1 1059 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 MON1BQ7L1V2 547 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 ARCQ7LC44 396 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 TAC4Q86UU9 113 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 UNC45BQ8IWX7 931 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 FAM217AQ8IXS0 508 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 NT5C3BQ969T7 300 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 AZIN2Q96A70 460 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 P2RY11Q96G91 374 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 FCRL2Q96LA5 508 aaPredicted RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 NPY6RQ99463 290 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 P2RY13Q9BPV8 354 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 C11orf70Q9BRQ4 267 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 TRIM5Q9C035 493 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 SEPT11Q9NVA2 429 aaKnown RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 ADAM22Q9P0K1 906 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 MARK1Q9P0L2 795 aa10.14□□□□□ -0.79
LINC00339-210ENST00000635675 NDRG2Q9UN36 371 aaKnown RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 BZW2Q9Y6E2 419 aaKnown RBP10.14□□□□□ -0.79
LINC00339-210ENST00000635675 GOLGA8SH3BPF8 625 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 GFRA2O00451 464 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 DDX3XO00571 662 aaKnown RBP eCLIP10.13□□□□□ -0.792e-7■■□□□ 13.2
LINC00339-210ENST00000635675 NCAM2O15394 837 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 IRAK2O43187 625 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 LATS1O95835 1130 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 SERPING1P05155 500 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 CALB1P05937 261 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 GZMAP12544 262 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 CHKAP35790 457 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 RPS9P46781 194 aaKnown RBP10.13□□□□□ -0.79
LINC00339-210ENST00000635675 GSCP56915 257 aaPredicted RBP10.13□□□□□ -0.79
LINC00339-210ENST00000635675 RNASE9P60153 205 aaKnown RBP10.13□□□□□ -0.79
LINC00339-210ENST00000635675 CCINQ13939 588 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 TRIM14Q14142 442 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 ARID5BQ14865 1188 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 ANO4Q32M45 955 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 ADGRF1Q5T601 910 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 NUGGCQ68CJ6 796 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 FSTL4Q6MZW2 842 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 TRNP1Q6NT89 227 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 TPGS1Q6ZTW0 290 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 C12orf40Q86WS4 652 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 ETFBKMTQ8IXQ9 262 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 DRC7Q8IY82 874 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 MCOLN2Q8IZK6 566 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 CPXM2Q8N436 756 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 CD101Q93033 1021 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 ADAM33Q9BZ11 813 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 LMAN1LQ9HAT1 526 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 RRN3Q9NYV6 651 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 TAS2R14Q9NYV8 317 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00339-210ENST00000635675 CALCOCO1Q9P1Z2 691 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 WDR35Q9P2L0 1181 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 MIA3Q5JRA6 1907 aa10.13□□□□□ -0.79
LINC00339-210ENST00000635675 A0A0A0MRY4 1105 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 TCRBV5S1A1TA0A578 114 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 KCNU1A8MYU2 1149 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 ACSL4O60488 711 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 PENKP01210 267 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 PLEKP08567 350 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 TYRP14679 529 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 TFE3P19532 575 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 DRD1P21728 446 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 GBP1P32455 592 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 FLT3P36888 993 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 EIF2DP41214 584 aaKnown RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 MAGEA9P43362 315 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 SLC6A11P48066 632 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 SLC11A2P49281 568 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 NUBP1P53384 320 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 MESP2Q0VG99 397 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 GRSF1Q12849 480 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 TBX2Q13207 712 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 SLC25A52Q3SY17 297 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 ZC3H12AQ5D1E8 599 aaKnown RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 DGKKQ5KSL6 1271 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 OTUD1Q5VV17 481 aaPredicted RBP10.12□□□□□ -0.79
LINC00339-210ENST00000635675 FYB2Q5VWT5 728 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 PPP1R2P3Q6NXS1 205 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 WDR59Q6PJI9 974 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 PHLDB2Q86SQ0 1253 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 PHTF2Q8N3S3 785 aa10.12□□□□□ -0.79
LINC00339-210ENST00000635675 SYNPOQ8N3V7 929 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms