RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 TRIM21P19474 475 aaKnown RBP21.16■□□□□ 0.98
TARDBP-228ENST00000629725 SMAD1Q15797 465 aaKnown RBP21.16■□□□□ 0.98
TARDBP-228ENST00000629725 E2F4Q16254 413 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 KIF19Q2TAC6 998 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 CNNM4Q6P4Q7 775 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 ANKS1BQ7Z6G8 1248 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 FAM124AQ86V42 546 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 UNC93AQ86WB7 457 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 PARD3BQ8TEW8 1205 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 USP28Q96RU2 1077 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 ELOVL2Q9NXB9 296 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 NAGPAQ9UK23 515 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 SNX11Q9Y5W9 270 aa21.16■□□□□ 0.98
TARDBP-228ENST00000629725 VNN1O95497 513 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 PRKCHP24723 683 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 GRK6P43250 576 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 PSEN1P49768 467 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 CLDN10P78369 228 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 EIF4HQ15056 248 aaKnown RBP21.15■□□□□ 0.98
TARDBP-228ENST00000629725 TEAD4Q15561 434 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 SGSM1Q2NKQ1 1148 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 ENGASEQ8NFI3 743 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 ADAM32Q8TC27 787 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 PIWIL1Q96J94 861 aaKnown RBP21.15■□□□□ 0.98
TARDBP-228ENST00000629725 CIPCQ9C0C6 399 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 PNPLA8Q9NP80 782 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 TFIP11Q9UBB9 837 aaKnown RBP21.15■□□□□ 0.98
TARDBP-228ENST00000629725 ANKRD6Q9Y2G4 727 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 SLCO1B1Q9Y6L6 691 aa21.15■□□□□ 0.98
TARDBP-228ENST00000629725 COG7P83436 770 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 ARID5AQ03989 594 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 EHHADHQ08426 723 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 PTPRNQ16849 979 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 CCDC157Q569K6 752 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 SERPINA13PQ6UXR4 307 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 UNC13DQ70J99 1090 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 ZNF276Q8N554 614 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 DHX58Q96C10 678 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 CYFIP2Q96F07 1278 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 DCBLD2Q96PD2 775 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 UBL7Q96S82 380 aaPredicted RBP21.14■□□□□ 0.97
TARDBP-228ENST00000629725 CDK5RAP1Q96SZ6 601 aaKnown RBP21.14■□□□□ 0.97
TARDBP-228ENST00000629725 HNRNPABQ99729 332 aaKnown RBP21.14■□□□□ 0.97
TARDBP-228ENST00000629725 C7orf25Q9BPX7 421 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 DCLK3Q9C098 648 aa21.14■□□□□ 0.97
TARDBP-228ENST00000629725 C6orf106Q9H6K1 298 aaPredicted RBP21.14■□□□□ 0.97
TARDBP-228ENST00000629725 STX6O43752 255 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 CYBBP04839 570 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 RALAP11233 206 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 CORO1AP31146 461 aaKnown RBP21.13■□□□□ 0.97
TARDBP-228ENST00000629725 ABCG1P45844 678 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 C19orf57Q0VDD7 668 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 KNOP1Q1ED39 458 aaKnown RBP21.13■□□□□ 0.97
TARDBP-228ENST00000629725 SORCS1Q8WY21 1168 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 IGSF8Q969P0 613 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 SLC39A2Q9NP94 309 aa21.13■□□□□ 0.97
TARDBP-228ENST00000629725 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.13■□□□□ 0.97
TARDBP-228ENST00000629725 KNTC1P50748 2209 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 E9PAM4 449 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 TIMM44O43615 452 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 RPN1P04843 607 aaKnown RBP21.12■□□□□ 0.97
TARDBP-228ENST00000629725 HMBSP08397 361 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 SYT1P21579 422 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 ACSL1P33121 698 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 GRIA4P48058 902 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 CCT8P50990 548 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 KIF11P52732 1056 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 TMEM215Q68D42 235 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 DHRS13Q6UX07 377 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 CCDC186Q7Z3E2 898 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 SCD5Q86SK9 330 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 IQUBQ8NA54 791 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 RBBP8NLQ8NC74 664 aaPredicted RBP21.12■□□□□ 0.97
TARDBP-228ENST00000629725 OR2T3Q8NH03 318 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 PIP4K2CQ8TBX8 421 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 TAF4BQ92750 862 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 TM9SF3Q9HD45 589 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 OSGEPQ9NPF4 335 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 CLIC5Q9NZA1 410 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 RASAL2Q9UJF2 1139 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 AGO1Q9UL18 857 aaKnown RBP21.12■□□□□ 0.97
TARDBP-228ENST00000629725 CLEC4EQ9ULY5 219 aa21.12■□□□□ 0.97
TARDBP-228ENST00000629725 TP53BP1Q12888 1972 aaPredicted RBP21.12■□□□□ 0.97
TARDBP-228ENST00000629725 KCNK3O14649 394 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 PCDHGA12O60330 932 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 HLA-EP13747 358 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 ASPAP45381 313 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 EFEMP1Q12805 493 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 CUL4AQ13619 759 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 STK38Q15208 465 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 ZACNQ401N2 412 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 SPOPLQ6IQ16 392 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 DENND1CQ8IV53 801 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 GOLGA5Q8TBA6 731 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 DDI1Q8WTU0 396 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 SLC2A11Q9BYW1 496 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 LHX5Q9H2C1 402 aa21.11■□□□□ 0.97
TARDBP-228ENST00000629725 PLK4O00444 970 aa21.1■□□□□ 0.97
TARDBP-228ENST00000629725 ASS1P00966 412 aaKnown RBP21.1■□□□□ 0.97
TARDBP-228ENST00000629725 PRB1P04280 392 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms