RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 WDR59Q6PJI9 974 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 ZNF852Q6ZMS4 543 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 DENND1CQ8IV53 801 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 UNC45BQ8IWX7 931 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 C3orf20Q8ND61 904 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 CHFRQ96EP1 664 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 SLC39A13Q96H72 371 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 VCPIP1Q96JH7 1222 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 FCRL2Q96LA5 508 aaPredicted RBP21.14■□□□□ 0.97
PTCD3-220ENST00000627371 FAM204AQ9H8W3 233 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 ADAMTS1Q9UHI8 967 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 STAP1Q9ULZ2 295 aa21.14■□□□□ 0.97
PTCD3-220ENST00000627371 TMCO5BA8MYB1 307 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 AKR1B15C9JRZ8 316 aaPredicted RBP21.13■□□□□ 0.97
PTCD3-220ENST00000627371 RTN2O75298 545 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 GBP1P32455 592 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 FLT3P36888 993 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 TSR1Q2NL82 804 aaKnown RBP21.13■□□□□ 0.97
PTCD3-220ENST00000627371 LY6G5CQ5SRR4 150 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 TXNDC11Q6PKC3 985 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 PHLDB2Q86SQ0 1253 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 FAM217AQ8IXS0 508 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 FBXL6Q8N531 539 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 FLCNQ8NFG4 579 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 FAM3CQ92520 227 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 NT5C3BQ969T7 300 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 NPY6RQ99463 290 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.13■□□□□ 0.97
PTCD3-220ENST00000627371 LTB4R2Q9NPC1 389 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 SPHK2Q9NRA0 654 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 ZNHIT6Q9NWK9 470 aaKnown RBP21.13■□□□□ 0.97
PTCD3-220ENST00000627371 DDIT4Q9NX09 232 aa21.13■□□□□ 0.97
PTCD3-220ENST00000627371 MRPS17Q9Y2R5 130 aaKnown RBP21.13■□□□□ 0.97
PTCD3-220ENST00000627371 TCRBV5S1A1TA0A578 114 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 ADH5P11766 374 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 CD72P21854 359 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 CHKAP35790 457 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 GAB4Q2WGN9 574 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 OTUD1Q5VV17 481 aaPredicted RBP21.12■□□□□ 0.97
PTCD3-220ENST00000627371 TRNP1Q6NT89 227 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 CPXM2Q8N436 756 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 AZIN2Q96A70 460 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 SELENOOQ9BVL4 669 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 FOXQ1Q9C009 403 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 ISCUQ9H1K1 167 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 STOML2Q9UJZ1 356 aa21.12■□□□□ 0.97
PTCD3-220ENST00000627371 ZNF318Q5VUA4 2279 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 A0A087X0T9 212 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 SSU72P8A0A1W2PR75 194 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 M0QYT0 321 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 STK25O00506 426 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 HOXC11O43248 304 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-220ENST00000627371 FTLP02792 175 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-220ENST00000627371 FAM228BP0C875 321 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 KRT3P12035 628 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 RRM1P23921 792 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 SULT1E1P49888 294 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 CLCN5P51795 746 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 GAD2Q05329 585 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 MAPK8IP2Q13387 824 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-220ENST00000627371 UBXN2BQ14CS0 331 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 SLC25A52Q3SY17 297 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 DNAJC24Q6P3W2 148 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 TMEM25Q86YD3 366 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 EMC1Q8N766 993 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 PJA1Q8NG27 643 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 PGAP3Q96FM1 320 aaPredicted RBP21.11■□□□□ 0.97
PTCD3-220ENST00000627371 NELL2Q99435 816 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 ADAM33Q9BZ11 813 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 OSBPL6Q9BZF3 934 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 MARK1Q9P0L2 795 aa21.11■□□□□ 0.97
PTCD3-220ENST00000627371 SYNJ2BP-COX16A0A087WUM0 186 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 C2CD4BA6NLJ0 364 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 SIGLEC16A6NMB1 481 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 GJB6O95452 261 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 APOEP02649 317 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 AOC1P19801 751 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 TARSP26639 723 aaKnown RBP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 EIF4A3P38919 411 aaKnown RBP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 SLC11A2P49281 568 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 VCPP55072 806 aaKnown RBP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 ZC3H12AQ5D1E8 599 aaKnown RBP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 PPP1R15BQ5SWA1 713 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 ASTLQ6HA08 431 aaPredicted RBP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 TPGS1Q6ZTW0 290 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 BNIPLQ7Z465 357 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 DNAAF5Q86Y56 855 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 SUGP1Q8IWZ8 645 aaKnown RBP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 ZNF687Q8N1G0 1237 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 TC2NQ8N9U0 490 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 JOSD2Q8TAC2 188 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 TRIM11Q96F44 468 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 CFAP57Q96MR6 1250 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 LRFN3Q9BTN0 628 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 TMEM51Q9NW97 253 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.1■□□□□ 0.97
PTCD3-220ENST00000627371 COX16Q9P0S2 106 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 CALCOCO1Q9P1Z2 691 aa21.1■□□□□ 0.97
PTCD3-220ENST00000627371 TRDMT1O14717 391 aaKnown RBP21.09■□□□□ 0.97
PTCD3-220ENST00000627371 ACSL4O60488 711 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms