RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TNK2Q07912 1038 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 UBXN2BQ14CS0 331 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 ZNF77Q15935 545 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 DCAF6Q58WW2 860 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 TXNDC11Q6PKC3 985 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 DNAAF5Q86Y56 855 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 YAF2Q8IY57 180 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 C3orf20Q8ND61 904 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 MSANTD3Q96H12 275 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 SLC2A13Q96QE2 648 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 NELL2Q99435 816 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 SELENOOQ9BVL4 669 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 ISCUQ9H1K1 167 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 HPS4Q9NQG7 708 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 GTSE1Q9NYZ3 720 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 CFAP97Q9P2B7 532 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 NAALADL1Q9UQQ1 740 aa15.35■□□□□ 0.05
PNKP-221ENST00000627317 SLC12A8A0AV02 714 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 ANKRD62A6NC57 917 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 OTOL1A6NHN0 477 aaPredicted RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 LEFTY2O00292 366 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 MAN2B1O00754 1011 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 ATMINO43313 823 aaPredicted RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 FYNP06241 537 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 ABCB4P21439 1286 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 RRM1P23921 792 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 CTHP32929 405 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 CYLC1P35663 651 aaPredicted RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 MAGEA9P43362 315 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 SOX9P48436 509 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 COG7P83436 770 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 ZXDBP98169 803 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 ASTE1Q2TB18 679 aaPredicted RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 TMTC1Q8IUR5 882 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 C1orf210Q8IVY1 113 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 DEFB106AQ8N104 65 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 DQX1Q8TE96 717 aaKnown RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 ZFRQ96KR1 1074 aaKnown RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 FAM204AQ9H8W3 233 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 SPTLC3Q9NUV7 552 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.34■□□□□ 0.05
PNKP-221ENST00000627317 CNOT8Q9UFF9 292 aaKnown RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 STAP1Q9ULZ2 295 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 MRPS17Q9Y2R5 130 aaKnown RBP15.34■□□□□ 0.05
PNKP-221ENST00000627317 SH3BP1Q9Y3L3 701 aa15.34■□□□□ 0.05
PNKP-221ENST00000627317 SPECC1L-ADORA2AF8WAN1 911 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 MSI1O43347 362 aaKnown RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 IPO7O95373 1038 aaKnown RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 HMBSP08397 361 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 KRT3P12035 628 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 FECHP22830 423 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 NOS2P35228 1153 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 MATKP42679 507 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 MTF1Q14872 753 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 SYPL2Q5VXT5 272 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 CC2D1AQ6P1N0 951 aaPredicted RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 DCUN1D2Q6PH85 259 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 TAC4Q86UU9 113 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 CCDC170Q8IYT3 715 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 FAM3CQ92520 227 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 ATOH1Q92858 354 aaPredicted RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 SERPINB11Q96P15 392 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 BAG1Q99933 345 aaPredicted RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 KLF16Q9BXK1 252 aaPredicted RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 C8orf33Q9H7E9 229 aaPredicted RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 GKN1Q9NS71 199 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 PARVAQ9NVD7 372 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 THG1LQ9NWX6 298 aaKnown RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 RRN3Q9NYV6 651 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 SFMBT1Q9UHJ3 866 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 LSM7Q9UK45 103 aaKnown RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 HBS1LQ9Y450 684 aaKnown RBP15.33■□□□□ 0.04
PNKP-221ENST00000627317 SCINQ9Y6U3 715 aa15.33■□□□□ 0.04
PNKP-221ENST00000627317 SOWAHDA6NJG2 315 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 SIGLEC16A6NMB1 481 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 GJB6O95452 261 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 TRUB2O95900 331 aaKnown RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 H2AFZP0C0S5 128 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 CHRNB1P11230 501 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 GBP1P32455 592 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 FLT3P36888 993 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 SULT1E1P49888 294 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 KPNA1P52294 538 aaPredicted RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 NNTQ13423 1086 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 TRIP4Q15650 581 aaPredicted RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 TRIM68Q6AZZ1 485 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 C1orf228Q6PIY5 440 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 MAMSTRQ6ZN01 415 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 H2AFVQ71UI9 128 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 ARCQ7LC44 396 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 ALYREFQ86V81 257 aaKnown RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 RALGPS2Q86X27 583 aaPredicted RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 EMC1Q8N766 993 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 ADAM32Q8TC27 787 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 CSGALNACT1Q8TDX6 532 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 CTNNBL1Q8WYA6 563 aaPredicted RBP15.32■□□□□ 0.04
PNKP-221ENST00000627317 PLD4Q96BZ4 506 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 MCEEQ96PE7 176 aa15.32■□□□□ 0.04
PNKP-221ENST00000627317 CHRDQ9H2X0 955 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms