RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 BNIP3Q12983 259 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 DHX8Q14562 1220 aaKnown RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 INO80CQ6PI98 192 aaPredicted RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 KCTD17Q8N5Z5 321 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 RBBP8NLQ8NC74 664 aaPredicted RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 UCMAQ8WVF2 138 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 B3GNT5Q9BYG0 378 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 ELOVL2Q9NXB9 296 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 RBAKQ9NYW8 714 aaPredicted RBP14.66□□□□□ -0.06
SNX1-214ENST00000625244 IL37Q9NZH6 218 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 ABCA12Q86UK0 2595 aa14.66□□□□□ -0.06
SNX1-214ENST00000625244 DXOO77932 396 aaKnown RBP14.65□□□□□ -0.06
SNX1-214ENST00000625244 PRPHP41219 470 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 SLC5A3P53794 718 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 ERVPABLB-1P60509 514 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 POSTNQ15063 836 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 ANKRD1Q15327 319 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 SERPINA13PQ6UXR4 307 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 ATG14Q6ZNE5 492 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 PIWIL1Q96J94 861 aaKnown RBP14.65□□□□□ -0.06
SNX1-214ENST00000625244 CDK5RAP3Q96JB5 506 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 C8orf76Q96K31 380 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 MMS19Q96T76 1030 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 EBF2Q9HAK2 575 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 PDE11AQ9HCR9 933 aa14.65□□□□□ -0.06
SNX1-214ENST00000625244 LSM7Q9UK45 103 aaKnown RBP14.65□□□□□ -0.06
SNX1-214ENST00000625244 ITPR2Q14571 2701 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 FAM92AA1XBS5 289 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 GOLGA8IPA6NC78 632 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 GOLGA8JA6NMD2 632 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 PENKP01210 267 aaPredicted RBP14.64□□□□□ -0.07
SNX1-214ENST00000625244 TMEM191BP0C7N4 346 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 C7P10643 843 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 MYF5P13349 255 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 ACP1P24666 158 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 ABCD1P33897 745 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 KCNA1Q09470 495 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 CAMK2GQ13555 558 aaPredicted RBP14.64□□□□□ -0.07
SNX1-214ENST00000625244 UBAP2LQ14157 1087 aaKnown RBP14.64□□□□□ -0.07
SNX1-214ENST00000625244 SFMBT2Q5VUG0 894 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 FYB2Q5VWT5 728 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 TMEM215Q68D42 235 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 Q6ZNB5 142 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 LSMEM2Q8N112 164 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 OR5B17Q8NGF7 314 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 OR6B3Q8NGW1 331 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 VCPIP1Q96JH7 1222 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 SNX25Q9H3E2 840 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 ST6GALNAC4Q9H4F1 302 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 ASCL3Q9NQ33 180 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 CLEC4EQ9ULY5 219 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 NBASA2RRP1 2371 aa14.64□□□□□ -0.07
SNX1-214ENST00000625244 TP53BP1Q12888 1972 aaPredicted RBP14.64□□□□□ -0.07
SNX1-214ENST00000625244 A0A1W2PPC4 97 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 WNT9AO14904 365 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 YKT6O15498 198 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 SUV39H1O43463 412 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 LSSP48449 732 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 RPS14P62263 151 aaKnown RBP14.63□□□□□ -0.07
SNX1-214ENST00000625244 GNL2Q13823 731 aaKnown RBP14.63□□□□□ -0.07
SNX1-214ENST00000625244 KIAA0895LQ68EN5 471 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 KANSL1Q7Z3B3 1105 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 ANKS1BQ7Z6G8 1248 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 ZNF366Q8N895 744 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 CIPCQ9C0C6 399 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 UPF2Q9HAU5 1272 aaKnown RBP14.63□□□□□ -0.07
SNX1-214ENST00000625244 SGK2Q9HBY8 427 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 GDF3Q9NR23 364 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 STARD5Q9NSY2 213 aa14.63□□□□□ -0.07
SNX1-214ENST00000625244 MYH10P35580 1976 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 A0A1W2PR77 199 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 FAM47DPA6NHR8 397 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 MDM4O15151 490 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 PLXNA2O75051 1894 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 USP12O75317 370 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 TBCAO75347 108 aaKnown RBP14.62□□□□□ -0.07
SNX1-214ENST00000625244 KRT18P05783 430 aaKnown RBP14.62□□□□□ -0.07
SNX1-214ENST00000625244 ARRB1P49407 418 aaPredicted RBP14.62□□□□□ -0.07
SNX1-214ENST00000625244 E2F1Q01094 437 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 GOLGA8FQ08AF8 430 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 GOLGA8DPQ0D2H9 430 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 MCM6Q14566 821 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 PROX2Q3B8N5 592 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 LINC00303Q3SY05 128 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 CDCP2Q5VXM1 449 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 ZNF720Q7Z2F6 126 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 B3GALNT2Q8NCR0 500 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 FBXO18Q8NFZ0 1043 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 SKA1Q96BD8 255 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 POLR1BQ9H9Y6 1135 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 BLOC1S4Q9NUP1 217 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 INTS13Q9NVM9 706 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 OSER1Q9NX31 292 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 R3HCC1Q9Y3T6 440 aaKnown RBP14.62□□□□□ -0.07
SNX1-214ENST00000625244 CENPEQ02224 2701 aa14.62□□□□□ -0.07
SNX1-214ENST00000625244 TACC1O75410 805 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 PPP1R37O75864 691 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 AFPP02771 609 aaKnown RBP14.61□□□□□ -0.07
SNX1-214ENST00000625244 CD38P28907 300 aa14.61□□□□□ -0.07
SNX1-214ENST00000625244 ATP5C1P36542 298 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms