RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 RRN3Q9NYV6 651 aa13.71□□□□□ -0.21
C3orf56-201ENST00000624688 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.21
C3orf56-201ENST00000624688 FBXW11Q9UKB1 542 aa13.71□□□□□ -0.21
C3orf56-201ENST00000624688 OGDHLQ9ULD0 1010 aa13.71□□□□□ -0.21
C3orf56-201ENST00000624688 ZMYND8Q9ULU4 1186 aaPredicted RBP13.71□□□□□ -0.21
C3orf56-201ENST00000624688 PCDHB7Q9Y5E2 793 aa13.71□□□□□ -0.21
C3orf56-201ENST00000624688 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.71□□□□□ -0.21
C3orf56-201ENST00000624688 VWA8A3KMH1 1905 aa13.71□□□□□ -0.22
C3orf56-201ENST00000624688 FAM72CH0Y354 149 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 H3BRJ5 948 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 SMAPO00193 183 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 AIF1P55008 147 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 SEMA3BQ13214 749 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 SLC39A12Q504Y0 691 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 FAM72AQ5TYM5 149 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 FAM72DQ6L9T8 149 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 C4orf50Q6ZRC1 276 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 FAM72BQ86X60 149 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 CDKL3Q8IVW4 592 aaPredicted RBP13.7□□□□□ -0.22
C3orf56-201ENST00000624688 ZBED8Q8IZ13 594 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 TTC25Q96NG3 672 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 QKIQ96PU8 341 aaKnown RBP eCLIP13.7□□□□□ -0.22
C3orf56-201ENST00000624688 FAM193BQ96PV7 902 aaPredicted RBP13.7□□□□□ -0.22
C3orf56-201ENST00000624688 PRDM16Q9HAZ2 1276 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 DDIT4Q9NX09 232 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 PAK5Q9P286 719 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 CTNNAL1Q9UBT7 734 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 TANC1Q9C0D5 1861 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 SCN5AQ14524 2016 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 BRCA2P51587 3418 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 CREB3O43889 395 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 MFSD11O43934 449 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 GCAP28676 217 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 MMP13P45452 471 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 CXCR3P49682 368 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 ARL4CP56559 192 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 GPX6P59796 221 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 PPARDQ03181 441 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 STAT4Q14765 748 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 EFHC2Q5JST6 749 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 RFX8Q6ZV50 586 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 SEPT8Q92599 483 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 COLEC11Q9BWP8 271 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 EURLQ9NYK6 297 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 HCSTQ9UBK5 93 aa13.7□□□□□ -0.22
C3orf56-201ENST00000624688 CLUHO75153 1309 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 A0A087WUV0 522 aaPredicted RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 SYN3O14994 580 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 DCLK1O15075 740 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 CHADO15335 359 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 PQBP1O60828 265 aaKnown RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 TADA2AO75478 443 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 GCATO75600 419 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 IGLV3-25P01717 112 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 CCL5P13501 91 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 VAV1P15498 845 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 LSP1P33241 339 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 GRIK1P39086 918 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 MAGEA6P43360 314 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 PGFP49763 221 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 SLC5A3P53794 718 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 CBLBQ13191 982 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 EIF4EBP2Q13542 120 aaPredicted RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 MRPL58Q14197 206 aaKnown RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 PAFAH1B3Q15102 231 aaKnown RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 VARS2Q5ST30 1063 aaKnown RBP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 LEKR1Q6ZMV7 388 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 BEND5Q7L4P6 421 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 TAC4Q86UU9 113 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 ANKMY2Q8IV38 441 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 CYP4X1Q8N118 509 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 CCDC110Q8TBZ0 833 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 APBB2Q92870 758 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 SCLYQ96I15 445 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 MARCH5Q9NX47 278 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.69□□□□□ -0.22
C3orf56-201ENST00000624688 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 TET1Q8NFU7 2136 aa13.69□□□□□ -0.22
C3orf56-201ENST00000624688 SF3B1O75533 1304 aaKnown RBP eCLIP13.68□□□□□ -0.22
C3orf56-201ENST00000624688 EEF2KO00418 725 aaKnown RBP13.68□□□□□ -0.22
C3orf56-201ENST00000624688 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 F9P00740 461 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 SLC11A1P49279 550 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 MNX1P50219 401 aaPredicted RBP13.68□□□□□ -0.22
C3orf56-201ENST00000624688 CCDC38Q502W7 563 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 FAXCQ5TGI0 409 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 EXOC3L1Q86VI1 746 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 DCP1BQ8IZD4 617 aaKnown RBP13.68□□□□□ -0.22
C3orf56-201ENST00000624688 ABI1Q8IZP0 508 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 NETO2Q8NC67 525 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 MDM1Q8TC05 714 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 DQX1Q8TE96 717 aaKnown RBP13.68□□□□□ -0.22
C3orf56-201ENST00000624688 GPR62Q9BZJ7 368 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 RNF208Q9H0X6 261 aa13.68□□□□□ -0.22
C3orf56-201ENST00000624688 STMN4Q9H169 189 aaPredicted RBP13.68□□□□□ -0.22
C3orf56-201ENST00000624688 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms