RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ZNF335Q9H4Z2 1342 aaPredicted RBP15.65■□□□□ 0.1
PMS1-221ENST00000624204 RGL2O15211 777 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 CBFA2T3O75081 653 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 MMP8P22894 467 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 CDK9P50750 372 aaKnown RBP15.65■□□□□ 0.1
PMS1-221ENST00000624204 CRADDP78560 199 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 SCARA3Q6AZY7 606 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 DEPDC1BQ8WUY9 529 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 NLRP4Q96MN2 994 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 LENG8Q96PV6 779 aaPredicted RBP15.65■□□□□ 0.1
PMS1-221ENST00000624204 SERPINI1Q99574 410 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 TBC1D22BQ9NU19 505 aa15.65■□□□□ 0.1
PMS1-221ENST00000624204 ARHGEF37A1IGU5 675 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 TMEM247A6NEH6 219 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 FBP2O00757 339 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 STAM2O75886 525 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 MAPTP10636 758 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 IL1R2P27930 398 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 YWHAZP63104 245 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 PIGHQ14442 188 aaPredicted RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 TMEM53Q6P2H8 277 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 BORAQ6PGQ7 559 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 ARCQ7LC44 396 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 DQX1Q8TE96 717 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 ZNF668Q96K58 619 aaPredicted RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 MFSD14AQ96MC6 490 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 RNPEPQ9H4A4 650 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 NYAP2Q9P242 653 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 ZBTB14O43829 449 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 OCM2P0CE71 109 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 OCMP0CE72 109 aaPredicted RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 IL1R1P14778 569 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 TSHRP16473 764 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 QARSP47897 775 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 ROR1Q01973 937 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 TAF5Q15542 800 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 ADRM1Q16186 407 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 CDC42EP5Q6NZY7 148 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 TRIM50Q86XT4 487 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 UNC5BQ8IZJ1 945 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 TMEM161BQ8NDZ6 487 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 THAP11Q96EK4 314 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 EPS15L1Q9UBC2 864 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 STK39Q9UEW8 545 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 ASTN2O75129 1339 aaPredicted RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 OSBPP22059 807 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 CRHR1P34998 444 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 TMED10P49755 219 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 TDRD10Q5VZ19 366 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 SLC39A4Q6P5W5 647 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 BBS12Q6ZW61 710 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 SIAH1Q8IUQ4 282 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 APOBEC3GQ9HC16 384 aaKnown RBP15.64■□□□□ 0.09
PMS1-221ENST00000624204 EBF1Q9UH73 591 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 COQ6Q9Y2Z9 468 aa15.64■□□□□ 0.09
PMS1-221ENST00000624204 BIRC5O15392 142 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 ZNF23P17027 643 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 PTPN1P18031 435 aaKnown RBP15.63■□□□□ 0.09
PMS1-221ENST00000624204 RFC1P35251 1148 aaPredicted RBP15.63■□□□□ 0.09
PMS1-221ENST00000624204 NUP107P57740 925 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 KLF10Q13118 480 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 ABCB5Q2M3G0 1257 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 PPM1LQ5SGD2 360 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 SNX32Q86XE0 403 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 C10orf107Q8IVU9 208 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 ADCY4Q8NFM4 1077 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 CALB1P05937 261 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 ACO1P21399 889 aaKnown RBP15.63■□□□□ 0.09
PMS1-221ENST00000624204 HADHQ16836 314 aaKnown RBP15.63■□□□□ 0.09
PMS1-221ENST00000624204 MBLAC2Q68D91 279 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 SCYL2Q6P3W7 929 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 C16orf87Q6PH81 154 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 COX4I2Q96KJ9 171 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 PGLYRP2Q96PD5 576 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 TMEM79Q9BSE2 394 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 UNKQ9C0B0 810 aaKnown RBP15.63■□□□□ 0.09
PMS1-221ENST00000624204 RIMS3Q9UJD0 308 aa15.63■□□□□ 0.09
PMS1-221ENST00000624204 KANSL1LA0AUZ9 987 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 CCDC78A2IDD5 438 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 TMX2-CTNND1H3BSU7 103 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 GRAP2O75791 330 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 APOEP02649 317 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 FGF3P11487 239 aaPredicted RBP15.62■□□□□ 0.09
PMS1-221ENST00000624204 KDELR1P24390 212 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 L1CAMP32004 1257 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 NDST2P52849 883 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 CDK18Q07002 472 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 MMRN1Q13201 1228 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 FSCBQ5H9T9 825 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 MAP4K3Q8IVH8 894 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 MYO1HQ8N1T3 1032 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 EHMT1Q9H9B1 1298 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 KCNH7Q9NS40 1196 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 TSC22D4Q9Y3Q8 395 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 CDK5RAP2Q96SN8 1893 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 HTR3EA5X5Y0 456 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 STX16-NPEPL1H3BU86 382 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 KCNN4O15554 427 aa15.62■□□□□ 0.09
PMS1-221ENST00000624204 ZC3H11AO75152 810 aaKnown RBP eCLIP15.62■□□□□ 0.09
PMS1-221ENST00000624204 SERPINB7O75635 380 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms