RNA–Protein interactions for RNA: ENST00000623185.3

LINC00963-216, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 786 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-216ENST00000623185 ZNF77Q15935 545 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 BRMS1LQ5PSV4 323 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 NUGGCQ68CJ6 796 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 KIAA1328Q86T90 577 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 TAC4Q86UU9 113 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 ADGRG2Q8IZP9 1017 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 SLC44A3Q8N4M1 653 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 NIPA2Q8N8Q9 360 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 ZNF564Q8TBZ8 553 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-216ENST00000623185 DEPDC1BQ8WUY9 529 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 FGF14Q92915 247 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 OTUB2Q96DC9 234 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-216ENST00000623185 LACRTQ9GZZ8 138 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 SMG9Q9H0W8 520 aaKnown RBP12.97□□□□□ -0.33
LINC00963-216ENST00000623185 KCNK12Q9HB15 430 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 SMPD4Q9NXE4 827 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 STOML2Q9UJZ1 356 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 SH3BP1Q9Y3L3 701 aa12.97□□□□□ -0.33
LINC00963-216ENST00000623185 ZNF638Q14966 1978 aaKnown RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 KLKB1P03952 638 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 PSMA2P25787 234 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 RDXP35241 583 aaKnown RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 PCK1P35558 622 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 CHKAP35790 457 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 AIF1P55008 147 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 ATP11AP98196 1134 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 NME3Q13232 169 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 C15orf59Q2T9L4 293 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 SH3PXD2AQ5TCZ1 1133 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 CC2D1AQ6P1N0 951 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 VITQ6UXI7 678 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 RNF10Q8N5U6 811 aaKnown RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 ADAM32Q8TC27 787 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 UBE2Q2Q8WVN8 375 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 RSPRY1Q96DX4 576 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 FCRL2Q96LA5 508 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 C1orf74Q96LT6 269 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 FAM83CQ9BQN1 747 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 DESI2Q9BSY9 194 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 RPP25Q9BUL9 199 aaKnown RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 TRMT61BQ9BVS5 477 aaKnown RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 IRX2Q9BZI1 471 aaPredicted RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 PLA2G2FQ9BZM2 168 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 TSGA10Q9BZW7 698 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 TRIM7Q9C029 511 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 KCNF1Q9H3M0 494 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 FAM204AQ9H8W3 233 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 OSGEPQ9NPF4 335 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 PIGVQ9NUD9 493 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 ARHGEF38Q9NXL2 777 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 ANAPC7Q9UJX3 599 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 LSM7Q9UK45 103 aaKnown RBP12.96□□□□□ -0.33
LINC00963-216ENST00000623185 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 DUSP10Q9Y6W6 482 aa12.96□□□□□ -0.33
LINC00963-216ENST00000623185 C2orf16Q68DN1 1984 aa12.96□□□□□ -0.34
LINC00963-216ENST00000623185 CHADO15335 359 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 CCP110O43303 1012 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 MSI1O43347 362 aaKnown RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 KRT86O43790 486 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 SP100P23497 879 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ADRA1BP35368 520 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 SLC1A1P43005 524 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 SLC11A2P49281 568 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 MLLT6P55198 1093 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 HDAC4P56524 1084 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 USP4Q13107 963 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 IFI16Q16666 785 aaKnown RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ARL13BQ3SXY8 428 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ARHGAP29Q52LW3 1261 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ZC3H12AQ5D1E8 599 aaKnown RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ADGRF1Q5T601 910 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 OTUD1Q5VV17 481 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 Q6ZNB5 142 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ARFGAP1Q8N6T3 406 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 ATP6V0D2Q8N8Y2 350 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 FAM172AQ8WUF8 416 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 OSCP1Q8WVF1 389 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 RNF34Q969K3 372 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 BTN2A3PQ96KV6 586 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 HAPLN3Q96S86 360 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 LINC00597Q9H2U6 94 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 TRPV5Q9NQA5 729 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 AGO1Q9UL18 857 aaKnown RBP12.95□□□□□ -0.34
LINC00963-216ENST00000623185 TFR2Q9UP52 801 aa12.95□□□□□ -0.34
LINC00963-216ENST00000623185 BRWD1Q9NSI6 2320 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 ACSL4O60488 711 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 PROSCO94903 275 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 SLC34A2O95436 690 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 APOEP02649 317 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 HMBSP08397 361 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
LINC00963-216ENST00000623185 MAN1A1P33908 653 aa12.94□□□□□ -0.34
LINC00963-216ENST00000623185 ZNF252P-AS1Q0IIN9 211 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms