RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 EMP3P54852 163 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 CC2D2BQ6DHV5 1058 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 CLMNQ96JQ2 1002 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 KCNK16Q96T55 309 aa14.57□□□□□ -0.08
LDB3-209ENST00000623056 SEPT9Q9UHD8 586 aaPredicted RBP14.57□□□□□ -0.08
LDB3-209ENST00000623056 ARHGAP10A1A4S6 786 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 TESPA1A2RU30 521 aaPredicted RBP14.56□□□□□ -0.08
LDB3-209ENST00000623056 KCNN4O15554 427 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 FBXO21O94952 628 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 MYL4P12829 197 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 COX4I1P13073 169 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 POLR2BP30876 1174 aaKnown RBP14.56□□□□□ -0.08
LDB3-209ENST00000623056 SLC5A2P31639 672 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 CAP2P40123 477 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 SERPINB9P50453 376 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 GALK1P51570 392 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 SULT2A1Q06520 285 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 KRT81Q14533 505 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 STXBP5Q5T5C0 1151 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 N4BP2L1Q5TBK1 243 aaPredicted RBP14.56□□□□□ -0.08
LDB3-209ENST00000623056 PAOXQ6QHF9 649 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 TIFABQ6ZNK6 161 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 ALDH16A1Q8IZ83 802 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 GSDMBQ8TAX9 411 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 ABTB1Q969K4 478 aaPredicted RBP14.56□□□□□ -0.08
LDB3-209ENST00000623056 SORT1Q99523 831 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 GLIS2Q9BZE0 524 aaPredicted RBP14.56□□□□□ -0.08
LDB3-209ENST00000623056 SDCBP2Q9H190 292 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 ARHGAP26Q9UNA1 814 aa14.56□□□□□ -0.08
LDB3-209ENST00000623056 ZNF195O14628 629 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 ACAT1P24752 427 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 ARRB2P32121 409 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 HDAC4P56524 1084 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 MYL6P60660 151 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 CNTN2Q02246 1040 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 TMED1Q13445 227 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 DCTN2Q13561 401 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 APOFQ13790 326 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 STYK1Q6J9G0 422 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 IYDQ6PHW0 289 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 CPXCR1Q8N123 301 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 RDM1Q8NG50 284 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 CEP70Q8NHQ1 597 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PPP4R1Q8TF05 950 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 DEPDC1BQ8WUY9 529 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PRPF18Q99633 342 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 MRPL1Q9BYD6 325 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 CYP26B1Q9NR63 512 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 USP18Q9UMW8 372 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 WDR81Q562E7 1941 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 SCN9AQ15858 1988 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 DCXO43602 365 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 ATP6V1G1O75348 118 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 ATG7O95352 703 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 LDHAP00338 332 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 SERPINE1P05121 402 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 ALOX15P16050 662 aaPredicted RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 ABCD1P33897 745 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 CLCN2P51788 898 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 CDH6P55285 790 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 YWHAEP62258 255 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 GHRHRQ02643 423 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PCLAFQ15004 111 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 RARS2Q5T160 578 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 SLFN12LQ6IEE8 588 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 SWSAP1Q6NVH7 229 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 DUS1LQ6P1R4 473 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 MPP5Q8N3R9 675 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 DIS3LQ8TF46 1054 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 ATP6V0A1Q93050 837 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 LRRC39Q96DD0 335 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PRMT6Q96LA8 375 aaPredicted RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 LRGUKQ96M69 825 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PEBP4Q96S96 227 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 TARS2Q9BW92 718 aaKnown RBP14.55□□□□□ -0.08
LDB3-209ENST00000623056 NIF3L1Q9GZT8 377 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 KLC2Q9H0B6 622 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 FAM96AQ9H5X1 160 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 PACSIN3Q9UKS6 424 aa14.55□□□□□ -0.08
LDB3-209ENST00000623056 SPDYE16A6NNV3 312 aaPredicted RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 PLIN3O60664 434 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 PRDX6P30041 224 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 MAGEA6P43360 314 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 SERPINB8P50452 374 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 RPS6P62753 249 aaKnown RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 FKBP1AP62942 108 aaKnown RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 BORAQ6PGQ7 559 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 SCARA5Q6ZMJ2 495 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 ZNF410Q86VK4 478 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 XYLT1Q86Y38 959 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 C10orf107Q8IVU9 208 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 MAP7D3Q8IWC1 876 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 RTP4Q96DX8 246 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 SIGLEC10Q96LC7 697 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 CPXM1Q96SM3 734 aa14.54□□□□□ -0.08
LDB3-209ENST00000623056 EBNA1BP2Q99848 306 aaKnown RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 SUDS3Q9H7L9 328 aaPredicted RBP14.54□□□□□ -0.08
LDB3-209ENST00000623056 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.54□□□□□ -0.08
LDB3-209ENST00000623056 TMOD2Q9NZR1 351 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms