RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 SLC9A9Q8IVB4 645 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 CEP57L1Q8IYX8 460 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 TMC2Q8TDI7 906 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 TAS1R2Q8TE23 839 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 SORCS1Q8WY21 1168 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 TAF4BQ92750 862 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 FOXJ1Q92949 421 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 NT5C1AQ9BXI3 368 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 FAM124BQ9H5Z6 455 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 FAM13BQ9NYF5 915 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 WSB2Q9NYS7 404 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 THAP10Q9P2Z0 257 aaPredicted RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 FBXO10Q9UK96 956 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 FNDC3AQ9Y2H6 1198 aaKnown RBP11.51□□□□□ -0.57
LINC00963-214ENST00000622680 SLCO1B1Q9Y6L6 691 aa11.51□□□□□ -0.57
LINC00963-214ENST00000622680 A0A1B0GTW7 788 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 HLA-EP13747 358 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 GCLMP48507 274 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 COPAP53621 1224 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 BNC1Q01954 994 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 PPP3CAQ08209 521 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 SLC14A1Q13336 389 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 PKP1Q13835 747 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 ZNF234Q14588 700 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 ACAP1Q15027 740 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 KLHDC10Q6PID8 442 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 CCDC186Q7Z3E2 898 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 ANKS1BQ7Z6G8 1248 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 SLCO6A1Q86UG4 719 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 FAM124AQ86V42 546 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 ZNF366Q8N895 744 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 MDM1Q8TC05 714 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 ADAMTS14Q8WXS8 1223 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 SNX19Q92543 992 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 PAGE5Q96GU1 130 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 IMPG2Q9BZV3 1241 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 NIF3L1Q9GZT8 377 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 GAREM1Q9H706 876 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 PNPLA8Q9NP80 782 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 EIF2B4Q9UI10 523 aaKnown RBP11.5□□□□□ -0.57
LINC00963-214ENST00000622680 PCOLCE2Q9UKZ9 415 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 SLC27A6Q9Y2P4 619 aa11.5□□□□□ -0.57
LINC00963-214ENST00000622680 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 ATMQ13315 3056 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 DOCK4Q8N1I0 1966 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 PDXKO00764 312 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 CBFA2T3O75081 653 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 CILPO75339 1184 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 F13A1P00488 732 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 SLFN14P0C7P3 912 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 ZSCAN22P10073 491 aaPredicted RBP11.49□□□□□ -0.57
LINC00963-214ENST00000622680 RALAP11233 206 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 VAMP7P51809 220 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 ENPP2Q13822 863 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 HNRNPDQ14103 355 aaKnown RBP11.49□□□□□ -0.57
LINC00963-214ENST00000622680 TMEM215Q68D42 235 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 MARCH9Q86YJ5 346 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 TMPRSS6Q8IU80 811 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 SETD7Q8WTS6 366 aaKnown RBP11.49□□□□□ -0.57
LINC00963-214ENST00000622680 DNASE2BQ8WZ79 361 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 SIPA1Q96FS4 1042 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 PIWIL1Q96J94 861 aaKnown RBP11.49□□□□□ -0.57
LINC00963-214ENST00000622680 ARID3AQ99856 593 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 DUSP16Q9BY84 665 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 CIPCQ9C0C6 399 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 AGO1Q9UL18 857 aaKnown RBP11.49□□□□□ -0.57
LINC00963-214ENST00000622680 FRMD4BQ9Y2L6 1034 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 GPSM3Q9Y4H4 160 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 USP3Q9Y6I4 520 aa11.49□□□□□ -0.57
LINC00963-214ENST00000622680 CFAP46Q8IYW2 2715 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 A0A1B0GVL5 298 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 A0A1B0GVT2 93 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 GOLGA8CPA6NN73 597 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 IKBKBO14920 756 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 BCAT2O15382 392 aaPredicted RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 SYNCRIPO60506 623 aaKnown RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 CER1O95813 267 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 EPHX1P07099 455 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 PDIA4P13667 645 aaKnown RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 PFKFB1P16118 471 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 TRIM21P19474 475 aaKnown RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 NR2F2P24468 414 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 MATKP42679 507 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 PSEN1P49768 467 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 DNM1Q05193 864 aaKnown RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 COL28A1Q2UY09 1125 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 LAYNQ6UX15 382 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 SERPINA13PQ6UXR4 307 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 TADA2BQ86TJ2 420 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 METTL3Q86U44 580 aaKnown RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 RBBP8NLQ8NC74 664 aaPredicted RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 BAHD1Q8TBE0 780 aaPredicted RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 DDI1Q8WTU0 396 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 TMEM174Q8WUU8 243 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 UCMAQ8WVF2 138 aa11.48□□□□□ -0.57
LINC00963-214ENST00000622680 PRCCQ92733 491 aaPredicted RBP11.48□□□□□ -0.57
LINC00963-214ENST00000622680 ZDHHC5Q9C0B5 715 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms