RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 PGM3O95394 542 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 SERPINA6P08185 405 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 AMHR2Q16671 573 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 CNPY1Q3B7I2 92 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 GRAMD1BQ3KR37 738 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 DNAL1Q4LDG9 190 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 C10orf107Q8IVU9 208 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 SIGLEC10Q96LC7 697 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 CNPY3Q9BT09 278 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 GJA3Q9Y6H8 435 aa16.29■□□□□ 0.2
NPHP4-211ENST00000622020 A6NJR5 290 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 SDR42E2A6NKP2 422 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 C2CD4BA6NLJ0 364 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 E9PBE3 544 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 GPR25O00155 361 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 DCXO43602 365 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 KLHL41O60662 606 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 OR6B1O95007 311 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 GSTA2P09210 222 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 ARRB2P32121 409 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 CPOXP36551 454 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 AP3M2P53677 418 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 MAP3K10Q02779 954 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 CUL3Q13618 768 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 EFHC1Q5JVL4 640 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 RABGAP1LQ5R372 815 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 DLK2Q6UY11 383 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 PHTF2Q8N3S3 785 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 C7orf31Q8N865 590 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 PIWIL2Q8TC59 973 aaKnown RBP16.28■□□□□ 0.2
NPHP4-211ENST00000622020 MCRS1Q96EZ8 462 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 FRMD8P1Q9BZ68 369 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-211ENST00000622020 IFT122Q9HBG6 1241 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 PCDH18Q9HCL0 1135 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 THAP1Q9NVV9 213 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 F8W8V4 182 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 ADCY6O43306 1168 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 SIN3BO75182 1162 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 MAFO75444 373 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-211ENST00000622020 SPAG6O75602 509 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 PRKCHP24723 683 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 ABCD1P33897 745 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 PMF1Q6P1K2 205 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 ZNF534Q76KX8 674 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 CMC1Q7Z7K0 106 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 MAP7D3Q8IWC1 876 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 TRIM42Q8IWZ5 723 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 RNF148Q8N7C7 305 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 GSDMBQ8TAX9 411 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 CLEC4CQ8WTT0 213 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 NIFKQ9BYG3 293 aaKnown RBP16.28■□□□□ 0.2
NPHP4-211ENST00000622020 S100A14Q9HCY8 104 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 HACL1Q9UJ83 578 aa16.28■□□□□ 0.2
NPHP4-211ENST00000622020 GOLGA8QA0A0J9YX86 632 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 GOLGA8OA6NCC3 632 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 GOLGA8NF8WBI6 632 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 HCRTO43612 131 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 PTPRAP18433 802 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 TARBP2Q15633 366 aaKnown RBP16.27■□□□□ 0.2
NPHP4-211ENST00000622020 MPZL3Q6UWV2 235 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 MAVSQ7Z434 540 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 OR6Y1Q8NGX8 325 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 GCNAQ96QF7 691 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 LGMNQ99538 433 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 EBNA1BP2Q99848 306 aaKnown RBP16.27■□□□□ 0.2
NPHP4-211ENST00000622020 DNAH12Q6ZR08 3092 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 SNNO75324 88 aaPredicted RBP16.27■□□□□ 0.2
NPHP4-211ENST00000622020 ALDOAP04075 364 aaKnown RBP16.27■□□□□ 0.2
NPHP4-211ENST00000622020 ITGA9Q13797 1035 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 KCNT2Q6UVM3 1135 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 PYROXD2Q8N2H3 581 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 GDPD5Q8WTR4 605 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 NMD3Q96D46 503 aaKnown RBP16.27■□□□□ 0.2
NPHP4-211ENST00000622020 CDT1Q9H211 546 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 OCEL1Q9H607 264 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 PDP2Q9P2J9 529 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 PPME1Q9Y570 386 aa16.27■□□□□ 0.2
NPHP4-211ENST00000622020 CCDC78A2IDD5 438 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 BUD23O43709 281 aaKnown RBP16.27■□□□□ 0.19
NPHP4-211ENST00000622020 CILPO75339 1184 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 SPATA31D3P0C874 917 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 ERVK-10P10266 1014 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 DPEP1P16444 411 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 CYP2F1P24903 491 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 CRHR1P34998 444 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 MLH1P40692 756 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 EFNA5P52803 228 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 COPAP53621 1224 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 PDE1CQ14123 709 aaPredicted RBP16.27■□□□□ 0.19
NPHP4-211ENST00000622020 TEDDM1Q5T9Z0 273 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 DHDDSQ86SQ9 333 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 ACOT1Q86TX2 421 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 FLAD1Q8NFF5 587 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 COPS5Q92905 334 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 AZIN2Q96A70 460 aa16.27■□□□□ 0.19
NPHP4-211ENST00000622020 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms