RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 CCNG2Q16589 344 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 POM121L1PQ3SYA9 428 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 FNDC3BQ53EP0 1204 aaKnown RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 C11orf63Q6NUN7 778 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 GBP7Q8N8V2 638 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 UROC1Q96N76 676 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 EIF2AQ9BY44 585 aaKnown RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 GRID1Q9ULK0 1009 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 CARNS1A5YM72 827 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 NCF1BA6NI72 391 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 NCF1CA8MVU1 366 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 RBAK-RBAKDNI3L0D1 243 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 NCF1P14598 390 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 PRMT2P55345 433 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 POU4F1Q01851 419 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 LRRC74AQ0VAA2 488 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 CNPY4Q8N129 248 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 ARMC2Q8NEN0 867 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 C2orf49Q9BVC5 232 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 RUBCNLQ9H714 662 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 IARS2Q9NSE4 1012 aaKnown RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 SAE1Q9UBE0 346 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 SPASTQ9UBP0 616 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 UBA2Q9UBT2 640 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 PNMA8BQ9ULN7 279 aaPredicted RBP9.51□□□□□ -0.89
GGA3-223ENST00000621870 SIK3Q9Y2K2 1263 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 ATRNL1Q5VV63 1379 aa9.51□□□□□ -0.89
GGA3-223ENST00000621870 TRAV19A0A0A6YYK7 116 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 FGFR1P11362 822 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 POLR2EP19388 210 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 ICAM3P32942 547 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 HTRA3P83110 453 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 TCEA2Q15560 299 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 AARS2Q5JTZ9 985 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 SERPINA13PQ6UXR4 307 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 DENND1CQ8IV53 801 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 MMGT1Q8N4V1 131 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 LZTR1Q8N653 840 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 CCDC138Q96M89 665 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 WWP1Q9H0M0 922 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 KDM4CQ9H3R0 1056 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 C10orf88Q9H8K7 445 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 EML4Q9HC35 981 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 CNTNAP1P78357 1384 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 ADAMTSL3P82987 1691 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 A0A0A6YYK5 440 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 LOC102724159A0A0B4J2E5 919 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 FAM237AA0A1B0GTK4 181 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 TMEM120BA0PK00 339 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 MEFVO15553 781 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 CST3P01034 146 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 CHKAP35790 457 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 KDSRQ06136 332 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 PWP2Q15269 919 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 ATP13A4Q4VNC1 1196 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 PPP1R26Q5T8A7 1209 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 RRM2BQ7LG56 351 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 SPATA20Q8TB22 786 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 HTR3CQ8WXA8 447 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 ETNK1Q9HBU6 452 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 FGFR1OP2Q9NVK5 253 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 DNMT3LQ9UJW3 386 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 RGPD8O14715 1765 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 MOXD2PA6NHM9 499 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 RNF103O00237 685 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 SLC9A3R1O14745 358 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 ALDH1A2O94788 518 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 EEF1B2P24534 225 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 GLUD2P49448 558 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 BCL2L1Q07817 233 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 SPDYE7PQ495Y7 208 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 FBXL19Q6PCT2 694 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 GRIN3AQ8TCU5 1115 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 TEKT4Q8WW24 435 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 ZIM3Q96PE6 472 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 UNKQ9C0B0 810 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 CYP4F12Q9HCS2 524 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 AVENQ9NQS1 362 aaPredicted RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 XPNPEP1Q9NQW7 623 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 ARHGAP28Q9P2N2 729 aa9.5□□□□□ -0.89
GGA3-223ENST00000621870 RRP15Q9Y3B9 282 aaKnown RBP9.5□□□□□ -0.89
GGA3-223ENST00000621870 PBX3P40426 434 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 RPL7AP62424 266 aaKnown RBP9.49□□□□□ -0.89
GGA3-223ENST00000621870 MPP3Q13368 585 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 PLCL1Q15111 1095 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 KRT80Q6KB66 452 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 CES3Q6UWW8 571 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 NYAP1Q6ZVC0 841 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 MAB21L3Q8N8X9 362 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 SPPL2BQ8TCT7 592 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 C7orf43Q8WVR3 580 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 SPATA16Q9BXB7 569 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 BCAS3Q9H6U6 928 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 NPHS2Q9NP85 383 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 SEPT3Q9UH03 358 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 COL1A2P08123 1366 aa9.49□□□□□ -0.89
GGA3-223ENST00000621870 AGRPO00253 132 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms