RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 WDCPQ9H6R7 721 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 SCML2Q9UQR0 700 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 SLC27A5Q9Y2P5 690 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 CDY1Q9Y6F8 540 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 PLXNA3P51805 1871 aa22.25■■□□□ 1.15
SPAST-204ENST00000621856 A0A1W2PQH9 124 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 NDC80O14777 642 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 SOAT2O75908 522 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 SYF2O95926 243 aaKnown RBP22.24■■□□□ 1.15
SPAST-204ENST00000621856 CXCR3P49682 368 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 SCAPQ12770 1279 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 BTG3Q14201 252 aaPredicted RBP22.24■■□□□ 1.15
SPAST-204ENST00000621856 PSMD5Q16401 504 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 SPDYCQ5MJ68 293 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 B4GALNT4Q76KP1 1039 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 SCD5Q86SK9 330 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 FBXO22Q8NEZ5 403 aa22.24■■□□□ 1.15
SPAST-204ENST00000621856 C2orf15Q8WU43 125 aaKnown RBP22.24■■□□□ 1.15
SPAST-204ENST00000621856 ZNF689Q96CS4 500 aaPredicted RBP22.24■■□□□ 1.15
SPAST-204ENST00000621856 EEF2KO00418 725 aaKnown RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 POLR3GO15318 223 aaPredicted RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 TP73O15350 636 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 MAP3K6O95382 1288 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 ARHGAP18Q8N392 663 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 GPR152Q8TDT2 470 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 TSPYL1Q9H0U9 437 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 PRDM16Q9HAZ2 1276 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 MTRRQ9UBK8 725 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 TPX2Q9ULW0 747 aaKnown RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 ZNF638Q14966 1978 aaKnown RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 EFEMP2O95967 443 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 HAPLN1P10915 354 aaPredicted RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 STIP1P31948 543 aaKnown RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 NR2C2P49116 596 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 GBE1Q04446 702 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 NCBP2-AS2Q69YL0 99 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 HIBCHQ6NVY1 386 aaPredicted RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 LRIG3Q6UXM1 1119 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 MON1AQ86VX9 555 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 CMTR2Q8IYT2 770 aaKnown RBP22.23■■□□□ 1.15
SPAST-204ENST00000621856 VN1R3Q9BXE9 311 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 TKTL2Q9H0I9 626 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 NMUR1Q9HB89 426 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 ANLNQ9NQW6 1124 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 ARHGEF4Q9NR80 690 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 PCDH10Q9P2E7 1040 aa22.23■■□□□ 1.15
SPAST-204ENST00000621856 CFAP69A5D8W1 941 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 C2CD2LO14523 706 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 RTN3O95197 1032 aaPredicted RBP22.22■■□□□ 1.15
SPAST-204ENST00000621856 RPL22P35268 128 aaKnown RBP22.22■■□□□ 1.15
SPAST-204ENST00000621856 CHKAP35790 457 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 PGFP49763 221 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 USP46P62068 366 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 DUSP4Q13115 394 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 DENND5BQ6ZUT9 1274 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 CDKL3Q8IVW4 592 aaPredicted RBP22.22■■□□□ 1.15
SPAST-204ENST00000621856 TMEM169Q96HH4 297 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 ADAM7Q9H2U9 754 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 CRISPLD1Q9H336 500 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 ETNK2Q9NVF9 386 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 GMIPQ9P107 970 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 BACE2Q9Y5Z0 518 aa22.22■■□□□ 1.15
SPAST-204ENST00000621856 KCNN4O15554 427 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 IRAK2O43187 625 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 BAIAP3O94812 1187 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 VNN2O95498 520 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 IGLV3-25P01717 112 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 RARGP13631 454 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 RPL17P18621 184 aaKnown RBP22.21■■□□□ 1.15
SPAST-204ENST00000621856 LAG3P18627 525 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 YWHAQP27348 245 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 TPI1P60174 286 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 RPL10AP62906 217 aaKnown RBP22.21■■□□□ 1.15
SPAST-204ENST00000621856 RFX8Q6ZV50 586 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 RNF168Q8IYW5 571 aaPredicted RBP22.21■■□□□ 1.15
SPAST-204ENST00000621856 SLC39A11Q8N1S5 342 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 FBXO32Q969P5 355 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 SH3GL2Q99962 352 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 PABPC3Q9H361 631 aaKnown RBP22.21■■□□□ 1.15
SPAST-204ENST00000621856 SMOC2Q9H3U7 446 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 IL23AQ9NPF7 189 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 MFHAS1Q9Y4C4 1052 aa22.21■■□□□ 1.15
SPAST-204ENST00000621856 MRPL42Q9Y6G3 142 aaKnown RBP22.21■■□□□ 1.15
SPAST-204ENST00000621856 ADAM12O43184 909 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 RNF40O75150 1001 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 OR1D2P34982 312 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 ACTN2P35609 894 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 XRCC4Q13426 336 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 DENND2CQ68D51 928 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 OTOP2Q7RTS6 562 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 PCGF5Q86SE9 256 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 COLGALT1Q8NBJ5 622 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 CASP10Q92851 521 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 SPATA17Q96L03 361 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 YME1L1Q96TA2 773 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 RC3H2Q9HBD1 1191 aaKnown RBP22.2■■□□□ 1.14
SPAST-204ENST00000621856 AAASQ9NRG9 546 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 DNAJC17Q9NVM6 304 aaKnown RBP22.2■■□□□ 1.14
SPAST-204ENST00000621856 SFMBT1Q9UHJ3 866 aa22.2■■□□□ 1.14
SPAST-204ENST00000621856 BCLAF3A2AJT9 711 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms