RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 ATXN1P54253 815 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 OASLQ15646 514 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 GALNTL6Q49A17 601 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 FAM209AQ5JX71 171 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 ZCCHC23Q6ZST2 131 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 VASH1Q7L8A9 365 aaPredicted RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 PRPF39Q86UA1 669 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 ST13P4Q8IZP2 240 aaPredicted RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 GABPB2Q8TAK5 448 aaPredicted RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 PGLYRP2Q96PD5 576 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 HAPLN3Q96S86 360 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 SDCBP2Q9H190 292 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 SNX25Q9H3E2 840 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 TRNAU1APQ9NX07 287 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 MAP3K20Q9NYL2 800 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 HESX1Q9UBX0 185 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 RABGEF1Q9UJ41 708 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 CLEC11AQ9Y240 323 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 NUMBLQ9Y6R0 609 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 SOWAHBA6NEL2 793 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 LACTBL1A8MY62 500 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 ALOX15BO15296 676 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 BDNFP23560 247 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 IL4RP24394 825 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 PHBP35232 272 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 ASPAP45381 313 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 STT3AP46977 705 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 DCTN2Q13561 401 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 MROH9Q5TGP6 573 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 FAM160B1Q5W0V3 765 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 JADE1Q6IE81 842 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 PPIL6Q8IXY8 311 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 DTX3Q8N9I9 347 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 VCPIP1Q96JH7 1222 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 HES2Q9Y543 173 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 A0A087WZ62 844 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 E5RJQ4 531 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 GPR25O00155 361 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 TCEA1P23193 301 aaKnown RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 GMPRP36959 345 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 NR1H3Q13133 447 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 NEK10Q6ZWH5 1172 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 WDR49Q8IV35 697 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 VPS52Q8N1B4 723 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 SLC25A41Q8N5S1 370 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 RXFP2Q8WXD0 754 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 NACC2Q96BF6 587 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 ATXN7L3BQ96GX2 97 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 SERAC1Q96JX3 654 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 TTC25Q96NG3 672 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 FDXACB1Q9BRP7 624 aaPredicted RBP11.06□□□□□ -0.64
CDH1-214ENST00000621016 RNPEPQ9H4A4 650 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 MANSC1Q9H8J5 431 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 TXLNGQ9NUQ3 528 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 SLC17A6Q9P2U8 582 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 PRKAG3Q9UGI9 489 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 LGALS13Q9UHV8 139 aa11.06□□□□□ -0.64
CDH1-214ENST00000621016 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 FAM237BA0A1B0GVD1 139 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 PRPSAP2O60256 369 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 EDF1O60869 148 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 SERPINB7O75635 380 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 MICAL2O94851 1124 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 YWHAEP62258 255 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 PDE1BQ01064 536 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 RELAQ04206 551 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 KDSRQ06136 332 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 PPIDQ08752 370 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 PPP2R5DQ14738 602 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 ACSBG2Q5FVE4 666 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 PPP2R2DQ66LE6 453 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 ACOT1Q86TX2 421 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 UNC5BQ8IZJ1 945 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 MCUR1Q96AQ8 359 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 KLRG1Q96E93 195 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 ACAP3Q96P50 834 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 DCLRE1BQ9H816 532 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 PCDH9Q9HC56 1237 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 TCRBV9S1A1TA0A576 114 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 HAUS5O94927 633 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 KRT7P08729 469 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 TXNP10599 105 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 HMGB2P26583 209 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 CDK7P50613 346 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 YARSP54577 528 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 MAP3K10Q02779 954 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 VGLL4Q14135 290 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 DPYSL3Q14195 570 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 PCSK7Q16549 785 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 C1orf127Q8N9H9 656 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 MTMR14Q8NCE2 650 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 GAB3Q8WWW8 586 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 RILPQ96NA2 401 aa11.05□□□□□ -0.64
CDH1-214ENST00000621016 WDR83Q9BRX9 315 aaKnown RBP11.05□□□□□ -0.64
CDH1-214ENST00000621016 TSSK1BQ9BXA7 367 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms