RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 USP39Q53GS9 565 aaKnown RBP16.9■□□□□ 0.3
CD40-207ENST00000620709 SNX30Q5VWJ9 437 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 TOGARAM2Q6ZUX3 1019 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 KIAA1958Q8N8K9 716 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 TXNDC5Q8NBS9 432 aaKnown RBP16.9■□□□□ 0.3
CD40-207ENST00000620709 HEXIM2Q96MH2 286 aaKnown RBP16.9■□□□□ 0.3
CD40-207ENST00000620709 STK33Q9BYT3 514 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 AIPL1Q9NZN9 384 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 DNAJC12Q9UKB3 198 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 NUDT5Q9UKK9 219 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 MMP17Q9ULZ9 603 aa16.9■□□□□ 0.3
CD40-207ENST00000620709 NCOR2Q9Y618 2525 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 A0A1W2PQH9 124 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 TBC1D3BA6NDS4 549 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 CILPO75339 1184 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 SERPING1P05155 500 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 CCDC175P0C221 793 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 ZDHHC11BP0C7U3 371 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 ATP5C1P36542 298 aaKnown RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 MRPS21P82921 87 aaKnown RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 CREB5Q02930 508 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 INCA1Q0VD86 236 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 GJB7Q6PEY0 223 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 TMEM25Q86YD3 366 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 NT5C1BQ96P26 610 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 DUSP15Q9H1R2 295 aaPredicted RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 NHEJ1Q9H9Q4 299 aaPredicted RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 TRMT1Q9NXH9 659 aaKnown RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 BCCIPQ9P287 314 aaKnown RBP eCLIP16.89■□□□□ 0.29
CD40-207ENST00000620709 AJAP1Q9UKB5 411 aaPredicted RBP16.89■□□□□ 0.29
CD40-207ENST00000620709 PPP2R2CQ9Y2T4 447 aa16.89■□□□□ 0.29
CD40-207ENST00000620709 SSU72P8A0A1W2PR75 194 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 FAM92AA1XBS5 289 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 USP27XA6NNY8 438 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 SLC30A4O14863 429 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 MDM4O15151 490 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 FOXD2O60548 495 aaPredicted RBP16.88■□□□□ 0.29
CD40-207ENST00000620709 ALDH1A2O94788 518 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 NDUFA10O95299 355 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 RARGP13631 454 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 CLCN1P35523 988 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 MPLP40238 635 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 STAT1P42224 750 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 GRIA2P42262 883 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 CRY1Q16526 586 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 TDRD12Q587J7 1177 aaKnown RBP16.88■□□□□ 0.29
CD40-207ENST00000620709 C10orf120Q5SQS8 335 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 PPP1R26Q5T8A7 1209 aaPredicted RBP16.88■□□□□ 0.29
CD40-207ENST00000620709 IL31Q6EBC2 164 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 PGBD3Q8N328 593 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 WHAMMQ8TF30 809 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 OTUB2Q96DC9 234 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 ZC3H10Q96K80 434 aaKnown RBP16.88■□□□□ 0.29
CD40-207ENST00000620709 FAM81BQ96LP2 452 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 DESI2Q9BSY9 194 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 DEF6Q9H4E7 631 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 NMUR1Q9HB89 426 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 SPHK2Q9NRA0 654 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 ARHGAP20Q9P2F6 1191 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 DEC1Q9P2X7 70 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 NAGPAQ9UK23 515 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 LSM7Q9UK45 103 aaKnown RBP16.88■□□□□ 0.29
CD40-207ENST00000620709 SCML2Q9UQR0 700 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 ADGRG1Q9Y653 693 aa16.88■□□□□ 0.29
CD40-207ENST00000620709 EPN1Q9Y6I3 576 aaPredicted RBP16.88■□□□□ 0.29
CD40-207ENST00000620709 GOLGA6L9A6NEM1 432 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 HHLA1C9JL84 531 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 F8VZ95 297 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 SGK1O00141 431 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 ZNF806P0C7X5 589 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 FERP16591 822 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 EIF2DP41214 584 aaKnown RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 DRAP1Q14919 205 aaPredicted RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 PPM1JQ5JR12 505 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 EOGTQ5NDL2 527 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 TMEM92Q6UXU6 159 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 TPGS1Q6ZTW0 290 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 IL17RCQ8NAC3 791 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 PPP1R13BQ96KQ4 1090 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 KLF16Q9BXK1 252 aaPredicted RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 UBE2TQ9NPD8 197 aaPredicted RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 OSER1Q9NX31 292 aa16.87■□□□□ 0.29
CD40-207ENST00000620709 BZW2Q9Y6E2 419 aaKnown RBP16.87■□□□□ 0.29
CD40-207ENST00000620709 NEDD8-MDP1E9PL57 170 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 TULP3O75386 442 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 CCDC172P0C7W6 258 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 SOX5P35711 763 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 EIF4A3P38919 411 aaKnown RBP16.86■□□□□ 0.29
CD40-207ENST00000620709 TNFRSF4P43489 277 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 MFAP3P55082 362 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 KLHL30Q0D2K2 578 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 C10orf76Q5T2E6 689 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 HGSNATQ68CP4 663 aa16.86■□□□□ 0.29
CD40-207ENST00000620709 TCEAL6Q6IPX3 200 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms