RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 PNOCQ13519 176 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 WDR45BQ5MNZ6 344 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 SH3PXD2AQ5TCZ1 1133 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 FOXR2Q6PJQ5 311 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 SIX6OS1Q8N1H7 587 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 SCML4Q8N228 414 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 HDDC3Q8N4P3 179 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 SPATA20Q8TB22 786 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 DHTKD1Q96HY7 919 aaPredicted RBP12.48□□□□□ -0.41
UPF3B-204ENST00000619445 CEP63Q96MT8 703 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 NUDT5Q9UKK9 219 aa12.48□□□□□ -0.41
UPF3B-204ENST00000619445 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ANTXRLA6NF34 631 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 PATE3B3GLJ2 98 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 PRRT4C9JH25 899 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 MDM4O15151 490 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 P4HA2O15460 535 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 KLKB1P03952 638 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 CFIP05156 583 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 PAEPP09466 180 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ENGP17813 658 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ITPKAP23677 461 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 OXTRP30559 389 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 MFAP3P55082 362 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ARID5AQ03989 594 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ENPP2Q13822 863 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 UAP1L1Q3KQV9 507 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 MPPE1Q53F39 396 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 FYB2Q5VWT5 728 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 TOGARAM2Q6ZUX3 1019 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ARMCX6Q7L4S7 300 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 FAM217AQ8IXS0 508 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 SMYD4Q8IYR2 804 aaPredicted RBP12.47□□□□□ -0.41
UPF3B-204ENST00000619445 KCTD13Q8WZ19 329 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 MRGPRX1Q96LB2 322 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ZDHHC5Q9C0B5 715 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 CD248Q9HCU0 757 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ZDHHC4Q9NPG8 344 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 CNGB3Q9NQW8 809 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 ABCC13Q9NSE7 274 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 THAP10Q9P2Z0 257 aaPredicted RBP12.47□□□□□ -0.41
UPF3B-204ENST00000619445 TSPAN16Q9UKR8 245 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
UPF3B-204ENST00000619445 HCN2Q9UL51 889 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 STON1Q9Y6Q2 735 aa12.47□□□□□ -0.41
UPF3B-204ENST00000619445 SLC12A8A0AV02 714 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 TRIM24O15164 1050 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 OPHN1O60890 802 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CD19P15391 556 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 WASP42768 502 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 SLC14A1Q13336 389 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 TRIP4Q15650 581 aaPredicted RBP12.46□□□□□ -0.41
UPF3B-204ENST00000619445 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CBWD6Q4V339 395 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CBWD3Q5JTY5 395 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CBWD5Q5RIA9 395 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 ANKRD40Q6AI12 368 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 DENND1CQ8IV53 801 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CADM4Q8NFZ8 388 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 WFIKKN2Q8TEU8 576 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 DDI1Q8WTU0 396 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 IRGQQ8WZA9 623 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 TATDN2Q93075 761 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 BHMTQ93088 406 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 SLC35C1Q96A29 364 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 EEF2KMTQ96G04 330 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 ZNF419Q96HQ0 510 aaPredicted RBP12.46□□□□□ -0.41
UPF3B-204ENST00000619445 NT5C1BQ96P26 610 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 ACOX2Q99424 681 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 ARID3AQ99856 593 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 ULBP1Q9BZM6 244 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 PCED1AQ9H1Q7 454 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 FBRSQ9HAH7 460 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 PRDM16Q9HAZ2 1276 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CAPN10Q9HC96 672 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 TMEM74BQ9NUR3 256 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 ELOVL2Q9NXB9 296 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 PLK2Q9NYY3 685 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CYP8B1Q9UNU6 501 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CHD6Q8TD26 2715 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 CKAP5Q14008 2032 aa12.46□□□□□ -0.41
UPF3B-204ENST00000619445 BICDL2A1A5D9 508 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 TMEM8BA6NDV4 472 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 H0Y626 953 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 SART1O43290 800 aaKnown RBP12.45□□□□□ -0.42
UPF3B-204ENST00000619445 TRIM16O95361 564 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 GNA14O95837 355 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 CD6P30203 668 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 MAPK8P45983 427 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 FMO5P49326 533 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 ADGRF1Q5T601 910 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 KIAA1211LQ6NV74 962 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 LCLAT1Q6UWP7 414 aa12.45□□□□□ -0.42
UPF3B-204ENST00000619445 KIAA1324Q6UXG2 1013 aaKnown RBP12.45□□□□□ -0.42
UPF3B-204ENST00000619445 UNC45BQ8IWX7 931 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms