RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 IRF1P10914 325 aa11.8□□□□□ -0.52
PCDHA4-204ENST00000618834 CDC42EP1Q00587 391 aa11.8□□□□□ -0.52
PCDHA4-204ENST00000618834 DLG3Q92796 817 aa11.8□□□□□ -0.52
PCDHA4-204ENST00000618834 SERAC1Q96JX3 654 aa11.8□□□□□ -0.52
PCDHA4-204ENST00000618834 ADPRHL2Q9NX46 363 aa11.8□□□□□ -0.52
PCDHA4-204ENST00000618834 EFCAB6Q5THR3 1501 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PRRG1O14668 218 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 H2AFXP16104 143 aaPredicted RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 RPS6KA3P51812 740 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 RUNDC3AQ59EK9 446 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 DRG1Q9Y295 367 aaKnown RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 FSBPO95073 299 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 TOP3AQ13472 1001 aaPredicted RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 NR6A1Q15406 480 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 FAM129BQ96TA1 746 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 S100A13Q99584 98 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 COA1Q9GZY4 146 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 MYBP10242 640 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 RARGP13631 454 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ALX1Q15699 326 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ITFG1Q8TB96 612 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 NSMCE2Q96MF7 247 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 RNF145Q96MT1 663 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 SEPT5Q99719 369 aaPredicted RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 JMJD4Q9H9V9 463 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 GLI2P10070 1586 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PLA2G6O60733 806 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 TPBGLP0DKB5 382 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 STIP1P31948 543 aaKnown RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 SLC26A3P40879 764 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PDK2Q15119 407 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 VANGL2Q9ULK5 521 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 GSTK1Q9Y2Q3 226 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 HMBSP08397 361 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PCSK1P29120 753 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ZDHHC13Q8IUH4 622 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 DSN1Q9H410 356 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 LIMD1Q9UGP4 676 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 EIF3MQ7L2H7 374 aaKnown RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PROX1Q92786 737 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 APOPT1Q96IL0 206 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PLGRKTQ9HBL7 147 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 KLHL28Q9NXS3 571 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PPP2R3BQ9Y5P8 575 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 SNX9Q9Y5X1 595 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PLEKP08567 350 aaPredicted RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ITGA9Q13797 1035 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 FRG1Q14331 258 aaKnown RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 NECAB2Q7Z6G3 386 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ACTRT1Q8TDG2 376 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 PYDC1Q8WXC3 89 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ZNF668Q96K58 619 aaPredicted RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 H3BMM5 538 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 QRICH1Q2TAL8 776 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 KLHDC7AQ5VTJ3 777 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 ADHFE1Q8IWW8 467 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 DHRSXQ8N5I4 330 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 AMER2Q8N7J2 671 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 NIF3L1Q9GZT8 377 aa11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 CDC42EP4Q9H3Q1 356 aaKnown RBP11.79□□□□□ -0.52
PCDHA4-204ENST00000618834 KPNA5O15131 536 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ADCY6O43306 1168 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ALOX5P09917 674 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 S100GP29377 79 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 GEMP55040 296 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 TRAP1Q12931 704 aaKnown RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 NLGN1Q8N2Q7 840 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 MYLPFQ96A32 169 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 CPVLQ9H3G5 476 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 DGAT1O75907 488 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ROR2Q01974 943 aaKnown RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 FGD3Q5JSP0 725 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 GATAD2AQ86YP4 633 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 SIRT2Q8IXJ6 389 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 HPDLQ96IR7 371 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 C10orf120Q5SQS8 335 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 PRKAG3Q9UGI9 489 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 HLA-DRAP01903 254 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ERVK-10P10266 1014 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 TCF4P15884 667 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 GMFBP60983 142 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 BNC1Q01954 994 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 EMC2Q15006 297 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 FAM25EA8MYX2 175 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 LRPAP1P30533 357 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ZNF846Q147U1 533 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ULK3Q6PHR2 472 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ABRAXAS1Q6UWZ7 409 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 NET1Q7Z628 596 aaPredicted RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 SAR1AQ9NR31 198 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 COMMD3-BMI1R4GMX3 469 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ERVK-7P63135 1459 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 CPA3P15088 417 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 TAF13Q15543 124 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 N4BP2L1Q5TBK1 243 aaPredicted RBP11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 ZNF554Q86TJ5 538 aa11.78□□□□□ -0.52
PCDHA4-204ENST00000618834 TMEM143Q96AN5 459 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms