RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 ATRIPQ8WXE1 791 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 E2F7Q96AV8 911 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 FCRL2Q96LA5 508 aaPredicted RBP23.61■■□□□ 1.37
CBWD3-213ENST00000618217 FAM204AQ9H8W3 233 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 PIGVQ9NUD9 493 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 CFAP97Q9P2B7 532 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 SALL4Q9UJQ4 1053 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 DUSP10Q9Y6W6 482 aa23.61■■□□□ 1.37
CBWD3-213ENST00000618217 A0A0A6YYK5 440 aaPredicted RBP23.6■■□□□ 1.37
CBWD3-213ENST00000618217 HEPACAM2A8MVW5 462 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 BTNL10A8MVZ5 291 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 CCP110O43303 1012 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 CXCR3P49682 368 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 VITQ6UXI7 678 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 STRADAQ7RTN6 431 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 DDX42Q86XP3 938 aaKnown RBP eCLIP23.6■■□□□ 1.37
CBWD3-213ENST00000618217 KXD1Q9BQD3 176 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 ANAPC7Q9UJX3 599 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 NUMBLQ9Y6R0 609 aa23.6■■□□□ 1.37
CBWD3-213ENST00000618217 F9P00740 461 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 HMBSP08397 361 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 GBP1P32455 592 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 HADHBP55084 474 aaKnown RBP23.59■■□□□ 1.37
CBWD3-213ENST00000618217 TBX4P57082 545 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 NME3Q13232 169 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 HTR3DQ70Z44 454 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 KIAA1328Q86T90 577 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 MFSD6LQ8IWD5 586 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 ARFGAP1Q8N6T3 406 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 KIAA1958Q8N8K9 716 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 PLD4Q96BZ4 506 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 BTBD6Q96KE9 485 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 E2F8A0AVK6 867 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 KCNU1A8MYU2 1149 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 ATXN1P54253 815 aaKnown RBP23.59■■□□□ 1.37
CBWD3-213ENST00000618217 HDAC4P56524 1084 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 ZC3H12AQ5D1E8 599 aaKnown RBP23.59■■□□□ 1.37
CBWD3-213ENST00000618217 Q6ZNB5 142 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 NIPA2Q8N8Q9 360 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 BPIFB1Q8TDL5 484 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 FAM172AQ8WUF8 416 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 RSAD2Q8WXG1 361 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 NXPE3Q969Y0 559 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 KCNK12Q9HB15 430 aa23.59■■□□□ 1.37
CBWD3-213ENST00000618217 SYNJ2BP-COX16A0A087WUM0 186 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 MYO1FO00160 1098 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 IRF1P10914 325 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 PSMA2P25787 234 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 DEUP1Q05D60 604 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 FCHO2Q0JRZ9 810 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 CDO1Q16878 200 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 TMEM51Q9NW97 253 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 COX16Q9P0S2 106 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 IGSF9Q9P2J2 1179 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 IP6K2Q9UHH9 426 aa23.58■■□□□ 1.36
CBWD3-213ENST00000618217 CCDC175P0C221 793 aa23.57■■□□□ 1.36
CBWD3-213ENST00000618217 RDXP35241 583 aaKnown RBP23.57■■□□□ 1.36
CBWD3-213ENST00000618217 PPP2R5DQ14738 602 aa23.57■■□□□ 1.36
CBWD3-213ENST00000618217 TRIM44Q96DX7 344 aaPredicted RBP23.57■■□□□ 1.36
CBWD3-213ENST00000618217 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.57■■□□□ 1.36
CBWD3-213ENST00000618217 I6L893 689 aaPredicted RBP23.56■■□□□ 1.36
CBWD3-213ENST00000618217 CORO1AP31146 461 aaKnown RBP23.56■■□□□ 1.36
CBWD3-213ENST00000618217 PIGHQ14442 188 aaPredicted RBP23.56■■□□□ 1.36
CBWD3-213ENST00000618217 ACAP1Q15027 740 aa23.56■■□□□ 1.36
CBWD3-213ENST00000618217 NUGGCQ68CJ6 796 aa23.56■■□□□ 1.36
CBWD3-213ENST00000618217 ZNF662Q6ZS27 426 aa23.56■■□□□ 1.36
CBWD3-213ENST00000618217 ANLNQ9NQW6 1124 aa23.56■■□□□ 1.36
CBWD3-213ENST00000618217 TRIM10Q9UDY6 481 aa23.56■■□□□ 1.36
CBWD3-213ENST00000618217 PPP2R2CQ9Y2T4 447 aa23.56■■□□□ 1.36
CBWD3-213ENST00000618217 SCAMP3O14828 347 aaKnown RBP23.55■■□□□ 1.36
CBWD3-213ENST00000618217 SLC2A3P11169 496 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 PSMC3P17980 439 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 CCR1P32246 355 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 ARHGAP25P42331 645 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 KIF5AQ12840 1032 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.55■■□□□ 1.36
CBWD3-213ENST00000618217 UNC45BQ8IWX7 931 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 TXLNBQ8N3L3 684 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 SLC44A3Q8N4M1 653 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 TTC16Q8NEE8 873 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 DEPDC1BQ8WUY9 529 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 AZIN2Q96A70 460 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 DCLK3Q9C098 648 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 ARHGEF38Q9NXL2 777 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 STOML2Q9UJZ1 356 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 AGO1Q9UL18 857 aaKnown RBP23.55■■□□□ 1.36
CBWD3-213ENST00000618217 SH3BP1Q9Y3L3 701 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 LRCH4O75427 683 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 PROSCO94903 275 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 ASGR2P07307 311 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 HARS2P49590 506 aaKnown RBP23.55■■□□□ 1.36
CBWD3-213ENST00000618217 BRMS1LQ5PSV4 323 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 FAM131BQ86XD5 332 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 DENND1CQ8IV53 801 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 BBS7Q8IWZ6 715 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 ASIC4Q96FT7 647 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 FAM83CQ9BQN1 747 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 LINC00597Q9H2U6 94 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 WDCPQ9H6R7 721 aa23.55■■□□□ 1.36
CBWD3-213ENST00000618217 LCMT1Q9UIC8 334 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms