RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 HIPK3Q9H422 1215 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 LRRC4Q9HBW1 653 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 CDH9Q9ULB4 789 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 CLUHO75153 1309 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 TTC3P53804 2025 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 H7C0C1 242 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 HSPA1AP0DMV8 641 aaKnown RBP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 HSPA1BP0DMV9 641 aaKnown RBP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 TGM2P21980 687 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 AMPD1P23109 780 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 ITGB8P26012 769 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 ATP5OP48047 213 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 GJA8P48165 433 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 DAOAP59103 153 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 PDIA2Q13087 525 aaKnown RBP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 LRRC26Q2I0M4 334 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 FAM171BQ6P995 826 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 ANKMY2Q8IV38 441 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 AGGF1Q8N302 714 aaeCLIP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 PGBD4Q96DM1 585 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 SEZ6LQ9BYH1 1024 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 PIGVQ9NUD9 493 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 TBX21Q9UL17 535 aa18.16■□□□□ 0.5
CNOT3-209ENST00000617930 ZMYND8Q9ULU4 1186 aaPredicted RBP18.16■□□□□ 0.5
CNOT3-209ENST00000617930 SYNJ2BP-COX16A0A087WUM0 186 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 M0QZQ0 153 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 USP17L7P0C7H9 530 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 DRD4P21917 467 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 STIP1P31948 543 aaKnown RBP18.15■□□□□ 0.5
CNOT3-209ENST00000617930 GRIK3Q13003 919 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 CAPN12Q6ZSI9 719 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 IGDCC3Q8IVU1 814 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 ADAM32Q8TC27 787 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 MYLPFQ96A32 169 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 RTP4Q96DX8 246 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 PAWRQ96IZ0 340 aaKnown RBP18.15■□□□□ 0.5
CNOT3-209ENST00000617930 COX16Q9P0S2 106 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 ZNF487B1APH4 448 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 CYP11A1P05108 521 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 ABHD2P08910 425 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 NOS2P35228 1153 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 TUSC3Q13454 348 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 MPP2Q14168 576 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 NCBP2-AS2Q69YL0 99 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 ATXN2LQ8WWM7 1075 aaKnown RBP18.15■□□□□ 0.5
CNOT3-209ENST00000617930 RSPH1Q8WYR4 309 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 DNAJB4Q9UDY4 337 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 TBK1Q9UHD2 729 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 ATP11BQ9Y2G3 1177 aa18.15■□□□□ 0.5
CNOT3-209ENST00000617930 MICAL3Q7RTP6 2002 aa18.14■□□□□ 0.5
CNOT3-209ENST00000617930 BCLAF3A2AJT9 711 aaKnown RBP18.14■□□□□ 0.49
CNOT3-209ENST00000617930 E7ESA3 106 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 M0QYT0 321 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 KCNN4O15554 427 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 PIAS1O75925 651 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 CXCL10P02778 98 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 MNAT1P51948 309 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 SLC8A3P57103 927 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 DSC1Q08554 894 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 KCNJ11Q14654 390 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 C1orf53Q5VUE5 145 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 VSTM1Q6UX27 236 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 DEFB128Q7Z7B8 93 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 SIX6OS1Q8N1H7 587 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 ARHGEF2Q92974 986 aaKnown RBP18.14■□□□□ 0.49
CNOT3-209ENST00000617930 WDR6Q9NNW5 1121 aaKnown RBP18.14■□□□□ 0.49
CNOT3-209ENST00000617930 XPO7Q9UIA9 1087 aaKnown RBP18.14■□□□□ 0.49
CNOT3-209ENST00000617930 COL4A6Q14031 1691 aa18.14■□□□□ 0.49
CNOT3-209ENST00000617930 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.13■□□□□ 0.49
CNOT3-209ENST00000617930 EOMESO95936 686 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 BASP1P80723 227 aaKnown RBP18.13■□□□□ 0.49
CNOT3-209ENST00000617930 HIF1AQ16665 826 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 PCGF5Q86SE9 256 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 TP53INP2Q8IXH6 220 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 MAML1Q92585 1016 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 TOX2Q96NM4 488 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 NCAPGQ9BPX3 1015 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 ACBD6Q9BR61 282 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 POPDC2Q9HBU9 364 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 INTS9Q9NV88 658 aaKnown RBP18.13■□□□□ 0.49
CNOT3-209ENST00000617930 TBC1D13Q9NVG8 400 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 DTLQ9NZJ0 730 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 LGALS13Q9UHV8 139 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 FAM72CH0Y354 149 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 AVILO75366 819 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 ODC1P11926 461 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 SKIP12755 728 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 BDNFP23560 247 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 SSTR1P30872 391 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 NME3Q13232 169 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 INTS6LQ5JSJ4 861 aaKnown RBP18.13■□□□□ 0.49
CNOT3-209ENST00000617930 FAXCQ5TGI0 409 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 FAM72AQ5TYM5 149 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 FAM72DQ6L9T8 149 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 CENPUQ71F23 418 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 TAOK1Q7L7X3 1001 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 FAM72BQ86X60 149 aa18.13■□□□□ 0.49
CNOT3-209ENST00000617930 CCDC197Q8NCU1 140 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms