RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 FTHL17Q9BXU8 183 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 EPN3Q9H201 632 aa17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 PPANQ9NQ55 473 aaKnown RBP17.97■□□□□ 0.47
PCDHGC3-205ENST00000617641 CLUHO75153 1309 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 EXOC1LA0A1B0GW35 172 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 I6L893 689 aaPredicted RBP17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 MFSD11O43934 449 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 ADRA1BP35368 520 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 PRMT2P55345 433 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 GPX6P59796 221 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 XRCC4Q13426 336 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 MAPRE1Q15691 268 aaKnown RBP17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 BBS9Q3SYG4 887 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 PM20D1Q6GTS8 502 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 FAM126BQ8IXS8 530 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 DBF4BQ8NFT6 615 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 SCAMP5Q8TAC9 235 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 QKIQ96PU8 341 aaKnown RBP eCLIP17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 NR2E3Q9Y5X4 410 aa17.96■□□□□ 0.47
PCDHGC3-205ENST00000617641 E7ESA3 106 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FAM72CH0Y354 149 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 SMAPO00193 183 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 CHN1P15882 459 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 CREB1P16220 341 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FAM72AQ5TYM5 149 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 BSPRYQ5W0U4 402 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FAM72DQ6L9T8 149 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FAM72BQ86X60 149 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 SPATA2LQ8IUW3 424 aaPredicted RBP17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 PDIK1LQ8N165 341 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 PYROXD1Q8WU10 500 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FAM193BQ96PV7 902 aaPredicted RBP17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 PHACTR1Q9C0D0 580 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 TMEM161AQ9NX61 479 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 LGALS13Q9UHV8 139 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 CHADO15335 359 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 CDH16O75309 829 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 GCAP28676 217 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 IFRD2Q12894 506 aaPredicted RBP17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 SLC39A12Q504Y0 691 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 TAOK1Q7L7X3 1001 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FBXO36Q8NEA4 188 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 IRGQQ8WZA9 623 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 OLFM3Q96PB7 478 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 SLC9A7Q96T83 725 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 KANSL3Q9P2N6 904 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 FBXW11Q9UKB1 542 aa17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 ZMYND8Q9ULU4 1186 aaPredicted RBP17.95■□□□□ 0.46
PCDHGC3-205ENST00000617641 TMEM189-UBE2V1I3L0A0 370 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 EEF2KO00418 725 aaKnown RBP17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 ENPP3O14638 875 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 DGKIO75912 1065 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 GATMP50440 423 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 BFSP2Q13515 415 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 NTAN1Q96AB6 310 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 PGAP3Q96FM1 320 aaPredicted RBP17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 EURLQ9NYK6 297 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 E7EVH7 732 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 POC1B-GALNT4F8VUJ3 575 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 DNM1LO00429 736 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 VAV1P15498 845 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 ATP5DP30049 168 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 SSTR1P30872 391 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 GRIK1P39086 918 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 DPYSQ14117 519 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 C4orf50Q6ZRC1 276 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 RFX8Q6ZV50 586 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 LGMNQ99538 433 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 KLC2Q9H0B6 622 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 ETNK1Q9HBU6 452 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 PNPLA8Q9NP80 782 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 RRN3Q9NYV6 651 aa17.94■□□□□ 0.46
PCDHGC3-205ENST00000617641 PATJQ8NI35 1801 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 NDUFAB1O14561 156 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 AVILO75366 819 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 SCAPQ12770 1279 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 TMED2Q15363 201 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 TCTN1Q2MV58 587 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 PLEKHG4Q58EX7 1191 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 HEATR6Q6AI08 1181 aaKnown RBP17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 TAC4Q86UU9 113 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 IGDCC3Q8IVU1 814 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 ATP11CQ8NB49 1132 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 TFB1MQ8WVM0 346 aaKnown RBP17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 COLEC11Q9BWP8 271 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 CHMP2BQ9UQN3 213 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 TADA2AO75478 443 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 GCATO75600 419 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 METTL18O95568 372 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 CCT5P48643 541 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 SLC5A3P53794 718 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 AIF1P55008 147 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 MTFR1Q15390 333 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 NLRP14Q86W24 1093 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 ABI1Q8IZP0 508 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 MRRFQ96E11 262 aaKnown RBP17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 DEFB118Q96PH6 123 aa17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 ABI2Q9NYB9 513 aaPredicted RBP17.93■□□□□ 0.46
PCDHGC3-205ENST00000617641 HCSTQ9UBK5 93 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms