RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 GREB1Q4ZG55 1949 aa16.92■□□□□ 0.3
SNAP47-213ENST00000617596 ZNF638Q14966 1978 aaKnown RBP16.91■□□□□ 0.3
SNAP47-213ENST00000617596 LRRD1A4D1F6 860 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 ZNF840PA6NDX5 716 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 I6L893 689 aaPredicted RBP16.91■□□□□ 0.3
SNAP47-213ENST00000617596 ZDHHC11BP0C7U3 371 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 DESP17661 470 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 PPM1LQ5SGD2 360 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 TMEM150AQ86TG1 271 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 MIB1Q86YT6 1006 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 PNKPQ96T60 521 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 HERPUD2Q9BSE4 406 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 SNRNP25Q9BV90 132 aaKnown RBP16.91■□□□□ 0.3
SNAP47-213ENST00000617596 HEMGNQ9BXL5 484 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 CARD9Q9H257 536 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 IGFLR1Q9H665 355 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNAP47-213ENST00000617596 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
SNAP47-213ENST00000617596 COLQQ9Y215 455 aaPredicted RBP16.91■□□□□ 0.3
SNAP47-213ENST00000617596 C2orf78A6NCI8 922 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 TLR5O60602 858 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 ENDOD1O94919 500 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 GJA1P17302 382 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 MLLT1Q03111 559 aaPredicted RBP16.9■□□□□ 0.3
SNAP47-213ENST00000617596 C10orf120Q5SQS8 335 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 LRRC38Q5VT99 294 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 PDE12Q6L8Q7 609 aaKnown RBP16.9■□□□□ 0.3
SNAP47-213ENST00000617596 MFSD7Q6UXD7 560 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 KATNAL2Q8IYT4 538 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 PYROXD2Q8N2H3 581 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 ARHGAP18Q8N392 663 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 PBKQ96KB5 322 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CEP295NLQ96MC4 621 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 ZNF576Q9H609 170 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 TCRBV7S2A1N4TA0A589 114 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CTAGE15A4D2H0 777 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 FGGP02679 453 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 KRT7P08729 469 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CTAGE8P0CG41 777 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 KRT10P13645 584 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 KCTD19Q17RG1 926 aaPredicted RBP16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CCDC181Q5TID7 509 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 POLNQ7Z5Q5 900 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CTAGE6Q86UF2 777 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 ITIH5Q86UX2 942 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CTAGE4Q8IX94 777 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 C12orf76Q8N812 135 aaPredicted RBP16.9■□□□□ 0.3
SNAP47-213ENST00000617596 KCTD6Q8NC69 237 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 VN1R2Q8NFZ6 395 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 RNF34Q969K3 372 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 TRMT2BQ96GJ1 504 aaKnown RBP16.9■□□□□ 0.3
SNAP47-213ENST00000617596 RPGRIP1Q96KN7 1286 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CORO1BQ9BR76 489 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 SMOC2Q9H3U7 446 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 IL21Q9HBE4 155 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 CLIC5Q9NZA1 410 aa16.9■□□□□ 0.3
SNAP47-213ENST00000617596 TARSL2A2RTX5 802 aaKnown RBP16.89■□□□□ 0.29
SNAP47-213ENST00000617596 ZMYND10O75800 440 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 IGLV3-25P01717 112 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 HMBSP08397 361 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 RALAP11233 206 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 GABRR2P28476 465 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 GGCXP38435 758 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 ADCY2Q08462 1091 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 KAZNQ674X7 775 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 BEND5Q7L4P6 421 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 TRIM62Q9BVG3 475 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 AP1M1Q9BXS5 423 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 TRIOBPQ9H2D6 2365 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 PLEKHA4Q9H4M7 779 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 TRPM5Q9NZQ8 1165 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 RASAL2Q9UJF2 1139 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 NR2E1Q9Y466 385 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 SNX10Q9Y5X0 201 aa16.89■□□□□ 0.29
SNAP47-213ENST00000617596 COL4A4P53420 1690 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 C3orf70A6NLC5 250 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 IRAK2O43187 625 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 F11P03951 625 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 MYL4P12829 197 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 CDH6P55285 790 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 CYP4F8P98187 520 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 EIF4EBP2Q13542 120 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 ODF2Q5BJF6 829 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 PPP6R3Q5H9R7 873 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 ERMARDQ5T6L9 678 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 SEL1L2Q5TEA6 688 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 TMC8Q8IU68 726 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 RASGEF1CQ8N431 466 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 EXD1Q8NHP7 514 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 MRPL38Q96DV4 380 aaKnown RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 PGAP3Q96FM1 320 aaPredicted RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 CYP2S1Q96SQ9 504 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 CALN1Q9BXU9 219 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 LMAN2LQ9H0V9 348 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 DHX35Q9H5Z1 703 aaKnown RBP16.88■□□□□ 0.29
SNAP47-213ENST00000617596 WDCPQ9H6R7 721 aa16.88■□□□□ 0.29
SNAP47-213ENST00000617596 TRPC7Q9HCX4 862 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms