RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ENDOD1O94919 500 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 F9P00740 461 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 CCDC175P0C221 793 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 TCF3P15923 654 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 RDXP35241 583 aaKnown RBP16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 ZP2Q05996 745 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 ZNF252P-AS1Q0IIN9 211 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 KIF5AQ12840 1032 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 USP4Q13107 963 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 NNTQ13423 1086 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 TCEAL1Q15170 157 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 ZNF77Q15935 545 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 VITQ6UXI7 678 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 SND1Q7KZF4 910 aaKnown RBP eCLIP16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 STRADAQ7RTN6 431 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 BNIPLQ7Z465 357 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 BPIFB1Q8TDL5 484 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 CENPIQ92674 756 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 PLD4Q96BZ4 506 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 PGAP3Q96FM1 320 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 SLC39A13Q96H72 371 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 FCRL2Q96LA5 508 aaPredicted RBP16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 PIGVQ9NUD9 493 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 TRIM10Q9UDY6 481 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 IP6K2Q9UHH9 426 aa16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 LSM7Q9UK45 103 aaKnown RBP16.25■□□□□ 0.19
PCDHGC3-204ENST00000617222 A0A0A6YYK5 440 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 TMEM110-MUSTN1A8MSY1 372 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 BUB1O43683 1085 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 IGLV3-27P01718 113 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 KLKB1P03952 638 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 ASGR2P07307 311 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 DESP17661 470 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 CORO1AP31146 461 aaKnown RBP16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 HARS2P49590 506 aaKnown RBP16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 CXCR3P49682 368 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 NAP1L1P55209 391 aaKnown RBP16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 HDAC4P56524 1084 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 RING1Q06587 406 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 PIGHQ14442 188 aaPredicted RBP16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 SCYL2Q6P3W7 929 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 HTR3DQ70Z44 454 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 FAM131BQ86XD5 332 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 DENND1CQ8IV53 801 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 MFSD6LQ8IWD5 586 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 UNC45BQ8IWX7 931 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 DCLK3Q9C098 648 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 WDCPQ9H6R7 721 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 KCNK12Q9HB15 430 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 SALL4Q9UJQ4 1053 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 PPP2R2CQ9Y2T4 447 aa16.24■□□□□ 0.19
PCDHGC3-204ENST00000617222 DOCK8Q8NF50 2099 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 OBSL1O75147 1896 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 DENND4AQ7Z401 1863 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 E2F8A0AVK6 867 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 BTNL10A8MVZ5 291 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 GREM1O60565 184 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 RNF8O76064 485 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 MOCS2O96007 188 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 APOEP02649 317 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 SLC2A3P11169 496 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 PSMC3P17980 439 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 CCR1P32246 355 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 GRM2Q14416 872 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 MESDQ14696 234 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 PPP2R5DQ14738 602 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 NUGGCQ68CJ6 796 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 CC2D1AQ6P1N0 951 aaPredicted RBP16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 YAF2Q8IY57 180 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 NXPE3Q969Y0 559 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 LINC00597Q9H2U6 94 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 TMEM51Q9NW97 253 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 THG1LQ9NWX6 298 aaKnown RBP16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 IGSF9Q9P2J2 1179 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 SLC12A6Q9UHW9 1150 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 AGO1Q9UL18 857 aaKnown RBP16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 PAXBP1Q9Y5B6 917 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 DENND4CQ5VZ89 1909 aa16.23■□□□□ 0.19
PCDHGC3-204ENST00000617222 MACROD2A1Z1Q3 448 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 C19orf67A6NJJ6 358 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 KCNU1A8MYU2 1149 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 PROSCO94903 275 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 ARHGAP25P42331 645 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 HADHBP55084 474 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 ACAP1Q15027 740 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 DAB2IPQ5VWQ8 1189 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 Q6ZNB5 142 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 CPNE8Q86YQ8 564 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 BBS7Q8IWZ6 715 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 SLC44A3Q8N4M1 653 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 NIPA2Q8N8Q9 360 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 ATP6V0D2Q8N8Y2 350 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 DEPDC1BQ8WUY9 529 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 TRMT61BQ9BVS5 477 aaKnown RBP16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 TSGA10Q9BZW7 698 aa16.22■□□□□ 0.19
PCDHGC3-204ENST00000617222 TKTL2Q9H0I9 626 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms