RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 PTPRNQ16849 979 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 DCAF12L1Q5VU92 463 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 TDRD10Q5VZ19 366 aaKnown RBP18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 LRRC69Q6ZNQ3 347 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 CADM4Q8NFZ8 388 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 CACTINQ8WUQ7 758 aaKnown RBP18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 WBP2Q969T9 261 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 C8orf48Q96LL4 319 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 SLITRK1Q96PX8 696 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 SIX4Q9UIU6 781 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 ITGA11Q9UKX5 1188 aa18.55■□□□□ 0.56
TRAPPC3-209ENST00000616395 NAV2Q8IVL1 2488 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 A0A1B0GVT2 93 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 CAPN9O14815 690 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 RBP5P82980 135 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 MYO1EQ12965 1108 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 STK4Q13043 487 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 BRSK2Q8IWQ3 736 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 SYCP3Q8IZU3 236 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 SCFD1Q8WVM8 642 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 CBWD1Q9BRT8 395 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 XPO4Q9C0E2 1151 aaKnown RBP18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 USP36Q9P275 1121 aaKnown RBP18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 MAPK8IP1Q9UQF2 711 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 MUC22E2RYF6 1773 aaPredicted RBP18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 UBE4BO95155 1302 aa18.54■□□□□ 0.56
TRAPPC3-209ENST00000616395 GOLGA8IPA6NC78 632 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 GOLGA8JA6NMD2 632 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 METTL12A8MUP2 240 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 GNA14O95837 355 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 PRKCSHP14314 528 aaPredicted RBP18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 ZNF18P17022 549 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 CACNA2D1P54289 1103 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 CFHR1Q03591 330 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 SUZ12Q15022 739 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 DPH6Q7L8W6 267 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 LIMS2Q7Z4I7 341 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 METTL3Q86U44 580 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 MYCBPAPQ8TBZ2 947 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 NXPE2Q96DL1 559 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 PCIF1Q9H4Z3 704 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 ITM2CQ9NQX7 267 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 TMEM30AQ9NV96 361 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 EIF2B4Q9UI10 523 aaKnown RBP18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 EXOC7Q9UPT5 735 aa18.53■□□□□ 0.56
TRAPPC3-209ENST00000616395 KCNJ18B7U540 433 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 NEDD8-MDP1E9PL57 170 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 EIF3DO15371 548 aaKnown RBP eCLIP18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 CALUO43852 315 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 IRF1P10914 325 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 CSNK1EP49674 416 aaKnown RBP18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 SEMG2Q02383 582 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 EHHADHQ08426 723 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 FUT11Q495W5 492 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 MDH1BQ5I0G3 518 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 CDKAL1Q5VV42 579 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 PCSK4Q6UW60 755 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 EPM2AIP1Q7L775 607 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 HS2ST1Q7LGA3 356 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 NELFCDQ8IXH7 590 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 C1orf216Q8TAB5 229 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 DUSP9Q99956 384 aaKnown RBP18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 MTMR12Q9C0I1 747 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 RBAKQ9NYW8 714 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 GMIPQ9P107 970 aa18.52■□□□□ 0.56
TRAPPC3-209ENST00000616395 GFRA2O00451 464 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 RRP8O43159 456 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 CACNG3O60359 315 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 TYRP14679 529 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 RPL13P26373 211 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 KCNJ12Q14500 433 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 KIF19Q2TAC6 998 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 HECTD3Q5T447 861 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 GPR155Q7Z3F1 870 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 ZSCAN30Q86W11 494 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 TMPRSS12Q86WS5 348 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 CREBRFQ8IUR6 639 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 KIAA0895Q8NCT3 520 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 CCDC150Q8NCX0 1101 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 GOLGA5Q8TBA6 731 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 BBS2Q9BXC9 721 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 SRRTQ9BXP5 876 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 MKRN2Q9H000 416 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 CCSER2Q9H7U1 834 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 SAMSN1Q9NSI8 373 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 LIMA1Q9UHB6 759 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 CHORDC1Q9UHD1 332 aaPredicted RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 SNX11Q9Y5W9 270 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 SLCO1B1Q9Y6L6 691 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 STON1Q9Y6Q2 735 aa18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 GOLGA4Q13439 2230 aaKnown RBP18.51■□□□□ 0.55
TRAPPC3-209ENST00000616395 WARSP23381 471 aaKnown RBP18.5■□□□□ 0.55
TRAPPC3-209ENST00000616395 YWHAQP27348 245 aa18.5■□□□□ 0.55
TRAPPC3-209ENST00000616395 GRK6P43250 576 aa18.5■□□□□ 0.55
TRAPPC3-209ENST00000616395 TPMTP51580 245 aa18.5■□□□□ 0.55
TRAPPC3-209ENST00000616395 CLDN6P56747 220 aa18.5■□□□□ 0.55
TRAPPC3-209ENST00000616395 FKBP3Q00688 224 aaKnown RBP18.5■□□□□ 0.55
TRAPPC3-209ENST00000616395 TCP11X2Q5H9J9 407 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms