RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 P2RY11Q96G91 374 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 CAPN10Q9HC96 672 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 SLC27A6Q9Y2P4 619 aa19.88■□□□□ 0.77
CDX1-202ENST00000616154 UPK3BL1B0FP48 263 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 UPK3BL2E5RIL1 263 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 PENKP01210 267 aaPredicted RBP19.87■□□□□ 0.77
CDX1-202ENST00000616154 KLKB1P03952 638 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 SERPINF2P08697 491 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 COG7P83436 770 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 ZNF394Q53GI3 561 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 TCERG1LQ5VWI1 586 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 DEFB119Q8N690 84 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 SLC4A11Q8NBS3 891 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 BHMTQ93088 406 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 HEXIM2Q96MH2 286 aaKnown RBP19.87■□□□□ 0.77
CDX1-202ENST00000616154 UBXN6Q9BZV1 441 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 DCLK3Q9C098 648 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 NUP62CLQ9H1M0 184 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 CISHQ9NSE2 258 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 CACNA2D2Q9NY47 1150 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 PLK2Q9NYY3 685 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 RASAL2Q9UJF2 1139 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 CYP8B1Q9UNU6 501 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 RAD54BQ9Y620 910 aa19.87■□□□□ 0.77
CDX1-202ENST00000616154 CHKAP35790 457 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 GFPT1Q06210 699 aaPredicted RBP19.86■□□□□ 0.77
CDX1-202ENST00000616154 PAK1Q13153 545 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 RAB41Q5JT25 222 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 CCDC183Q5T5S1 534 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 FYB2Q5VWT5 728 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 ARHGAP17Q68EM7 881 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 UNQ6494/PRO21346Q6UXR6 183 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 PIP4P1Q86T03 277 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 SLC41A1Q8IVJ1 513 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 ARHGAP18Q8N392 663 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 TMEM176AQ96HP8 235 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 MRGPRX1Q96LB2 322 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 ARID3AQ99856 593 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 SLC32A1Q9H598 525 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 CKAP5Q14008 2032 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 ASPMQ8IZT6 3477 aa19.86■□□□□ 0.77
CDX1-202ENST00000616154 BIN1O00499 593 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 P4HA2O15460 535 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 GNA14O95837 355 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 FMO5P49326 533 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 ATXN3P54252 364 aaPredicted RBP19.85■□□□□ 0.77
CDX1-202ENST00000616154 RAD23BP54727 409 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 MFAP3P55082 362 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 EFEMP1Q12805 493 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 SEMA3BQ13214 749 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 KLHL10Q6JEL2 608 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 PIGZQ86VD9 579 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 TRIM59Q8IWR1 403 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 UBR7Q8N806 425 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 TATDN2Q93075 761 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 ERLEC1Q96DZ1 483 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 HSPA12BQ96MM6 686 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 FSCN3Q9NQT6 498 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 STON1Q9Y6Q2 735 aa19.85■□□□□ 0.77
CDX1-202ENST00000616154 C1QTNF9BB2RNN3 333 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 NPC1O15118 1278 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 C1QTNF9P0C862 333 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 CORO1AP31146 461 aaKnown RBP19.84■□□□□ 0.77
CDX1-202ENST00000616154 CUL2Q13617 745 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 CAVIN1Q6NZI2 390 aaKnown RBP19.84■□□□□ 0.77
CDX1-202ENST00000616154 METTL3Q86U44 580 aaKnown RBP19.84■□□□□ 0.77
CDX1-202ENST00000616154 HDDC3Q8N4P3 179 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 ANKRD52Q8NB46 1076 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 LMO3Q8TAP4 145 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 ZNF419Q96HQ0 510 aaPredicted RBP19.84■□□□□ 0.77
CDX1-202ENST00000616154 GTPBP2Q9BX10 602 aaKnown RBP19.84■□□□□ 0.77
CDX1-202ENST00000616154 ADAM33Q9BZ11 813 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 SLC6A17Q9H1V8 727 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 CD93Q9NPY3 652 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 AGO1Q9UL18 857 aaKnown RBP19.84■□□□□ 0.77
CDX1-202ENST00000616154 STRIP2Q9ULQ0 834 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 CTNND2Q9UQB3 1225 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 AKAP13Q12802 2813 aa19.84■□□□□ 0.77
CDX1-202ENST00000616154 WASH3PC4AMC7 463 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 HMBSP08397 361 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 ZNF132P52740 706 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 SLC8A3P57103 927 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 YWHAGP61981 247 aaKnown RBP eCLIP19.83■□□□□ 0.77
CDX1-202ENST00000616154 ENPP2Q13822 863 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 STARD3Q14849 445 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 GEN1Q17RS7 908 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 KIAA1324Q6UXG2 1013 aaKnown RBP19.83■□□□□ 0.77
CDX1-202ENST00000616154 CPXM2Q8N436 756 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 TMEM121BQ9BXQ6 578 aaPredicted RBP19.83■□□□□ 0.77
CDX1-202ENST00000616154 MARCH2Q9P0N8 246 aa19.83■□□□□ 0.77
CDX1-202ENST00000616154 THAP10Q9P2Z0 257 aaPredicted RBP19.83■□□□□ 0.77
CDX1-202ENST00000616154 ARHGAP33O14559 1287 aa19.82■□□□□ 0.76
CDX1-202ENST00000616154 OPHN1O60890 802 aa19.82■□□□□ 0.76
CDX1-202ENST00000616154 NDUFS2O75306 463 aa19.82■□□□□ 0.76
CDX1-202ENST00000616154 TOP3BO95985 862 aaKnown RBP19.82■□□□□ 0.76
CDX1-202ENST00000616154 SPINK2P20155 84 aa19.82■□□□□ 0.76
CDX1-202ENST00000616154 TBXAS1P24557 533 aaPredicted RBP19.82■□□□□ 0.76
CDX1-202ENST00000616154 CAMK4Q16566 473 aa19.82■□□□□ 0.76
CDX1-202ENST00000616154 FUT11Q495W5 492 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 700.8 ms