RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 PMF1Q6P1K2 205 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 RNF169Q8NCN4 708 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 PCDH19Q8TAB3 1148 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 FRMD8P1Q9BZ68 369 aaPredicted RBP14.25□□□□□ -0.13
HPS1-215ENST00000613394 ZNF358Q9NW07 568 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 KANSL3Q9P2N6 904 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 SOX13Q9UN79 622 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 LRRC42Q9Y546 428 aa14.25□□□□□ -0.13
HPS1-215ENST00000613394 CHADO15335 359 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 GNAZP19086 355 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 AVPR1AP37288 418 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 SATB1Q01826 763 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 PYROXD2Q8N2H3 581 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 CHST13Q8NET6 341 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 RAB3IL1Q8TBN0 382 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 PDGFCQ9NRA1 345 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 SLC4A7Q9Y6M7 1214 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 HCRTO43612 131 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 RALBP11234 206 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 TNFAIP2Q03169 654 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 TRMT5Q32P41 509 aaKnown RBP14.24□□□□□ -0.13
HPS1-215ENST00000613394 EFHC1Q5JVL4 640 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 MAP1SQ66K74 1059 aaPredicted RBP14.24□□□□□ -0.13
HPS1-215ENST00000613394 SMARCAD1Q9H4L7 1026 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 PRMT7Q9NVM4 692 aaPredicted RBP14.24□□□□□ -0.13
HPS1-215ENST00000613394 THAP1Q9NVV9 213 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 PCDHGC3Q9UN70 934 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 SERPINB9P50453 376 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 NUDT2P50583 147 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 ZNF132P52740 706 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 SIX6OS1Q8N1H7 587 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 CMASQ8NFW8 434 aaPredicted RBP14.24□□□□□ -0.13
HPS1-215ENST00000613394 CLEC4CQ8WTT0 213 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 TFB1MQ8WVM0 346 aaKnown RBP14.24□□□□□ -0.13
HPS1-215ENST00000613394 TEPSINQ96N21 525 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 PCYT2Q99447 389 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 WDR83Q9BRX9 315 aaKnown RBP14.24□□□□□ -0.13
HPS1-215ENST00000613394 SPATC1LQ9H0A9 340 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 NRDE2Q9H7Z3 1164 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 SLC39A10Q9ULF5 831 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 TEX264Q9Y6I9 313 aa14.24□□□□□ -0.13
HPS1-215ENST00000613394 ITM2AO43736 263 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 RARBP10826 455 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 GOT1P17174 413 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 ART3Q13508 389 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 OLIG2Q13516 323 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 PDK2Q15119 407 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 PIWIL2Q8TC59 973 aaKnown RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 USP13Q92995 863 aaPredicted RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 LRGUKQ96M69 825 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 XYLT2Q9H1B5 865 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 SLC7A8Q9UHI5 535 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 HBS1LQ9Y450 684 aaKnown RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 STYXL1Q9Y6J8 313 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 SDR42E2A6NKP2 422 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 PDPK2PQ6A1A2 396 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 SPATA24Q86W54 205 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 C10orf107Q8IVU9 208 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 TMA16Q96EY4 203 aaKnown RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 EBNA1BP2Q99848 306 aaKnown RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 CENPKQ9BS16 269 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 BFARQ9NZS9 450 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 STX18Q9P2W9 335 aaKnown RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 PPM1HQ9ULR3 514 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 PLA2G4CQ9UP65 541 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 MFHAS1Q9Y4C4 1052 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 PDE4DIPQ5VU43 2346 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 BPGMP07738 259 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 TFE3P19532 575 aaPredicted RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 GPD2P43304 727 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 TTLL4Q14679 1199 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 HSP90AA5PQ58FG0 334 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 AZIN2Q96A70 460 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 NMD3Q96D46 503 aaKnown RBP14.23□□□□□ -0.13
HPS1-215ENST00000613394 MOCOSQ96EN8 888 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 MARK4Q96L34 752 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 SIK2Q9H0K1 926 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 SNTG2Q9NY99 539 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 SIX4Q9UIU6 781 aa14.23□□□□□ -0.13
HPS1-215ENST00000613394 COL24A1Q17RW2 1714 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 CILPO75339 1184 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 ARIH2O95376 493 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 AKAP5P24588 427 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 SEPT6Q14141 434 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 RWDD4Q6NW29 188 aaKnown RBP14.22□□□□□ -0.13
HPS1-215ENST00000613394 MCUQ8NE86 351 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 GCNAQ96QF7 691 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 TASP1Q9H6P5 420 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 CAB39LQ9H9S4 337 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 XPNPEP3Q9NQH7 507 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 ADA2Q9NZK5 511 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 ZNF212Q9UDV6 495 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 SLC15A5A6NIM6 579 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 RNF103O00237 685 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 HBP1O60381 514 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 ACAT1P24752 427 aaKnown RBP14.22□□□□□ -0.13
HPS1-215ENST00000613394 PSMB4P28070 264 aa14.22□□□□□ -0.13
HPS1-215ENST00000613394 CLDN10P78369 228 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms