RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 CFAP57Q96MR6 1250 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 FAM111AQ96PZ2 611 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 ADAMTS10Q9H324 1103 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 NXF3Q9H4D5 531 aaKnown RBP12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 PTPRHQ9HD43 1115 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 PIH1D1Q9NWS0 290 aaKnown RBP12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 NDE1Q9NXR1 346 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 PCDHGA4Q9Y5G9 962 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 BOLA2-SMG1P6H3BVE0 249 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 DNALI1O14645 258 aaPredicted RBP12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 GPR32O75388 356 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 ITGB3P05106 788 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 VAV1P15498 845 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 BGNP21810 368 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 CDH8P55286 799 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 NR1H3Q13133 447 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 MPP3Q13368 585 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 CUL2Q13617 745 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 CTAGE3PQ8IX95 158 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 PIP4K2CQ8TBX8 421 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 ACTL9Q8TC94 416 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 SLITRK1Q96PX8 696 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 MTG1Q9BT17 334 aaPredicted RBP12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 SLC13A1Q9BZW2 595 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 TRMT13Q9NUP7 481 aaKnown RBP12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 POLIQ9UNA4 740 aa12.18□□□□□ -0.46
PPP4R3B-204ENST00000612688 COL1A2P08123 1366 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 CST8O60676 142 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 GRIA2P42262 883 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 OTUD4Q01804 1114 aaKnown RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 OCRLQ01968 901 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 MMRN1Q13201 1228 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 SNX17Q15036 470 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 CDO1Q16878 200 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 PABPC1LQ4VXU2 614 aaKnown RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 JOSD2Q8TAC2 188 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 FEZF2Q8TBJ5 459 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 ZNF606Q8WXB4 792 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 DTNBP1Q96EV8 351 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 KIF12Q96FN5 646 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 PAFAH2Q99487 392 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 WDR83Q9BRX9 315 aaKnown RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 KATNAL1Q9BW62 490 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 CALN1Q9BXU9 219 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 KANSL3Q9P2N6 904 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 LGALS13Q9UHV8 139 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 PACSIN3Q9UKS6 424 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 CLUHO75153 1309 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 FAM237BA0A1B0GVD1 139 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 SORBS2O94875 1100 aaKnown RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 TNNC2P02585 160 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 ITGA2BP08514 1039 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 HOXA11P31270 313 aaPredicted RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 GMPRP36959 345 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 THPOP40225 353 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 ARFIP2P53365 341 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 BMPR2Q13873 1038 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 SLC10A6Q3KNW5 377 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 SH3PXD2AQ5TCZ1 1133 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 TWF2Q6IBS0 349 aaKnown RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 DNAJC24Q6P3W2 148 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 MARK2Q7KZI7 788 aaKnown RBP12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 UNC45BQ8IWX7 931 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 PALM2Q8IXS6 379 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 NAT14Q8WUY8 206 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 CFAP36Q96G28 342 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 ACAP3Q96P50 834 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 RNF39Q9H2S5 420 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 CACNG4Q9UBN1 327 aa12.17□□□□□ -0.46
PPP4R3B-204ENST00000612688 E5RJQ4 531 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 INHAP05111 366 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 DARSP14868 501 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 ANPEPP15144 967 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 ACO1P21399 889 aaKnown RBP12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 HOXD10P28358 340 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 GJA9P57773 515 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 YWHAGP61981 247 aaKnown RBP eCLIP12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 CDC16Q13042 620 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 HIF1AQ16665 826 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 KCTD21Q4G0X4 260 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 SPOCD1Q6ZMY3 1216 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 RIPOR1Q6ZS17 1223 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 DENND1AQ8TEH3 1009 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 HSPBAP1Q96EW2 488 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 ANKRD36BP1Q96IX9 119 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 ECSITQ9BQ95 431 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 TMEM120AQ9BXJ8 343 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 CYP4F11Q9HBI6 524 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 COQ4Q9Y3A0 265 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 SMIM35A0A1B0GVV1 85 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 HAS3O00219 553 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 TRAFD1O14545 582 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 CYB561D2O14569 222 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 TMEM63AO94886 807 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 PROZP22891 400 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 IL1R2P27930 398 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 RFC1P35251 1148 aaPredicted RBP12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 CDK7P50613 346 aa12.16□□□□□ -0.46
PPP4R3B-204ENST00000612688 ATXN3P54252 364 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms