RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 GRAMD1AQ96CP6 724 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 SRPK1Q96SB4 655 aaKnown RBP14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 KCNK16Q96T55 309 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 PAAF1Q9BRP4 392 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 MARCOQ9UEW3 520 aaPredicted RBP14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 NRCAMQ92823 1304 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 IQANK1A0A1B0GTG1 560 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 NRP1O14786 923 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 USP12O75317 370 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 RPSAP08865 295 aaKnown RBP14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 MRPS5P82675 430 aaKnown RBP14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 AP1B1Q10567 949 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 RASA2Q15283 850 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 MDH1BQ5I0G3 518 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 RGS9BPQ6ZS82 235 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 ZCCHC23Q6ZST2 131 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 GPRIN1Q7Z2K8 1008 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 VPS52Q8N1B4 723 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 B3GALNT2Q8NCR0 500 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 RTP4Q96DX8 246 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 APOPT1Q96IL0 206 aa14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCDHGA3-202ENST00000612467 NUP205Q92621 2012 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 CFAP73A6NFT4 308 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 RRN3P2A6NIE6 340 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 KCNK1O00180 336 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 CELF2O95319 508 aaKnown RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 KITP10721 976 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 EPHB2P29323 1055 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 PSEN2P49810 448 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 TAF6P49848 677 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 SLC18A1P54219 525 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 SETDB1Q15047 1291 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 ANKRD23Q86SG2 305 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 SLC26A11Q86WA9 606 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 UNC93AQ86WB7 457 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 CENPIQ92674 756 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 TSSK1BQ9BXA7 367 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 ARHGEF4Q9NR80 690 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 GEMIN8Q9NWZ8 242 aaKnown RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 USP3Q9Y6I4 520 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 FAM237BA0A1B0GVD1 139 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 SMIM35A0A1B0GVV1 85 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 MBLAC1A4D2B0 266 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 M0QYT0 321 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 HUS1O60921 280 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 ZNF865P0CJ78 1059 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 CCNB1P14635 433 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 PTPN9P43378 593 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 SPRYD7Q5W111 196 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 HEATR6Q6AI08 1181 aaKnown RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 C16orf46Q6P387 395 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 KIRREL3Q8IZU9 778 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 CRYBG2Q8N1P7 616 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 CCNYQ8ND76 341 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 KCNV2Q8TDN2 545 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 WNT8BQ93098 351 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 SLC7A6OSQ96CW6 309 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 TACO1Q9BSH4 297 aaKnown RBP14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 MED10Q9BTT4 135 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 YY1AP1Q9H869 796 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 PIGVQ9NUD9 493 aa14.56□□□□□ -0.08
PCDHGA3-202ENST00000612467 RALGAPA2Q2PPJ7 1873 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 COPEO14579 308 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 RFPL1O75677 317 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 APOEP02649 317 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 SETSIPP0DME0 302 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 SERPINB4P48594 390 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 FAM110CQ1W6H9 321 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ANKRD20A2Q5SQ80 823 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ANKRD20A1Q5TYW2 823 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ANKRD20A3Q5VUR7 823 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 NME8Q8N427 588 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 GBP7Q8N8V2 638 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 C3orf58Q8NDZ4 430 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 AGAP3Q96P47 875 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 KCNK13Q9HB14 408 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 MIOSQ9NXC5 875 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ARMCX1Q9P291 453 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 HEY2Q9UBP5 337 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 DERAQ9Y315 318 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 CFAP69A5D8W1 941 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 NDC80O14777 642 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 MYCNP04198 464 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 SERPINB3P29508 390 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 MLH1P40692 756 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ABCG1P45844 678 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ADAM17P78536 824 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 SLC18A2Q05940 514 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 SWT1Q5T5J6 900 aaKnown RBP14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 CDKL3Q8IVW4 592 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 TTC39CQ8N584 583 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 HTR3CQ8WXA8 447 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 QKIQ96PU8 341 aaKnown RBP eCLIP14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 PHACTR1Q9C0D0 580 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 C20orf27Q9GZN8 174 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 FETUBQ9UGM5 382 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 ZFP69BQ9UJL9 534 aa14.55□□□□□ -0.08
PCDHGA3-202ENST00000612467 FZD10Q9ULW2 581 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms