RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 BEND5Q7L4P6 421 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 ZDHHC17Q8IUH5 632 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 PGBD3Q8N328 593 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 CCDC33Q8N5R6 958 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 SPACA7Q96KW9 195 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 HHIPQ96QV1 700 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 STK33Q9BYT3 514 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 SLC2A11Q9BYW1 496 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 PLCB1Q9NQ66 1216 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 TMEM51Q9NW97 253 aa12.86□□□□□ -0.35
CBWD3-208ENST00000612050 A0A0A0MRY4 1105 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 E5RJQ4 531 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 FOXN3O00409 490 aaPredicted RBP12.85□□□□□ -0.35
CBWD3-208ENST00000612050 IRAK2O43187 625 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 FOXD2O60548 495 aaPredicted RBP12.85□□□□□ -0.35
CBWD3-208ENST00000612050 CALCAP01258 141 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 SLC2A3P11169 496 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 TDGF1P13385 188 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 UBXN1Q04323 297 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 ADGRF1Q5T601 910 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 C11orf57Q6ZUT1 292 aaPredicted RBP12.85□□□□□ -0.35
CBWD3-208ENST00000612050 CACNA2D4Q7Z3S7 1137 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 TMEM110Q86TL2 294 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 C12orf40Q86WS4 652 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 PASD1Q8IV76 773 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 FAM71AQ8IYT1 594 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 CHPFQ8IZ52 775 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 ALLCQ8N6M5 410 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 TXNDC5Q8NBS9 432 aaKnown RBP12.85□□□□□ -0.35
CBWD3-208ENST00000612050 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 RNF34Q969K3 372 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 WBP2Q969T9 261 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
CBWD3-208ENST00000612050 ZSWIM1Q9BR11 485 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 SIX2Q9NPC8 291 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 PLK2Q9NYY3 685 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 FHOD1Q9Y613 1164 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 MYOFQ9NZM1 2061 aa12.85□□□□□ -0.35
CBWD3-208ENST00000612050 ATG2BQ96BY7 2078 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 MSI1O43347 362 aaKnown RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 GREM1O60565 184 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 HSF2BPO75031 334 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 RHOBTB1O94844 696 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 KLKB1P03952 638 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 NTSR1P30989 418 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 RPL34P49207 117 aaKnown RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 CDK17Q00537 523 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 APBA1Q02410 837 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 STARD3Q14849 445 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 EIF4HQ15056 248 aaKnown RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 CRY1Q16526 586 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 GAB4Q2WGN9 574 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 ANO6Q4KMQ2 910 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 PKN3Q6P5Z2 889 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 SND1Q7KZF4 910 aaKnown RBP eCLIP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 BHLHA9Q7RTU4 235 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 ANKS1BQ7Z6G8 1248 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 SLC47A2Q86VL8 602 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 ZNF677Q86XU0 584 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 AOPEPQ8N6M6 819 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 C1orf131Q8NDD1 294 aaKnown RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 CLEC4CQ8WTT0 213 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 FAM207AQ9NSI2 230 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 ASNSD1Q9NWL6 643 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 TJP2Q9UDY2 1190 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 EBF1Q9UH73 591 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 LIMA1Q9UHB6 759 aaKnown RBP12.84□□□□□ -0.35
CBWD3-208ENST00000612050 STARD13Q9Y3M8 1113 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 PAXBP1Q9Y5B6 917 aa12.84□□□□□ -0.35
CBWD3-208ENST00000612050 CACNA1HO95180 2353 aa12.83□□□□□ -0.35
CBWD3-208ENST00000612050 LGALS16A8MUM7 142 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 TIMM44O43615 452 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 LSM8O95777 96 aaKnown RBP12.83□□□□□ -0.36
CBWD3-208ENST00000612050 PENKP01210 267 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-208ENST00000612050 HOXB2P14652 356 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 CYP11B1P15538 503 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 ABCB4P21439 1286 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 SDHBP21912 280 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 STAT1P42224 750 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 PXNP49023 591 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-208ENST00000612050 POLR2FP61218 127 aaKnown RBP12.83□□□□□ -0.36
CBWD3-208ENST00000612050 KCNMA1Q12791 1236 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 DCAF6Q58WW2 860 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 ANO7Q6IWH7 933 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 ERICH1Q86X53 443 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 IL17RCQ8NAC3 791 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 SUMF1Q8NBK3 374 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 EZH1Q92800 747 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-208ENST00000612050 AZIN2Q96A70 460 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 BPIFA3Q9BQP9 254 aa12.83□□□□□ -0.36
CBWD3-208ENST00000612050 ACP6Q9NPH0 428 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms