RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 THP07101 528 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ERCC2P18074 760 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 NOS2P35228 1153 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 MDH1BQ5I0G3 518 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 N4BP2L1Q5TBK1 243 aaPredicted RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 WSCD1Q658N2 575 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 WDTC1Q8N5D0 677 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ATPAF2Q8N5M1 289 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 PABPC5Q96DU9 382 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 OXNAD1Q96HP4 312 aaPredicted RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 THTPAQ9BU02 230 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 OSBPL1AQ9BXW6 950 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SLC4A5Q9BY07 1137 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 C20orf96Q9NUD7 363 aaPredicted RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 TUBGCP4Q9UGJ1 667 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ERI2A8K979 691 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 TIMM44O43615 452 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 LTFP02788 710 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CCDC130P13994 396 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GOT1P17174 413 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SLC18A1P54219 525 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 MPP3Q13368 585 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 RPS6KA2Q15349 733 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CA9Q16790 459 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 FAM110CQ1W6H9 321 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GRAMD1BQ3KR37 738 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 FASTKD1Q53R41 847 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 SH3PXD2AQ5TCZ1 1133 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 RFX8Q6ZV50 586 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GPR142Q7Z601 462 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 TEX9Q8N6V9 391 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 EDEM1Q92611 657 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 NAF1Q96HR8 494 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 SENP8Q96LD8 212 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SSX2IPQ9Y2D8 614 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 C4BP0C0L5 1744 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 CLUHO75153 1309 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 KIF1CO43896 1103 aaKnown RBP6.57□□□□□ -1.36
SNX13-213ENST00000611725 ENTPD5O75356 428 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 KLHL2O95198 593 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ADRA1BP35368 520 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GAD2Q05329 585 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 ZNF252P-AS1Q0IIN9 211 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 INCA1Q0VD86 236 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 RASIP1Q5U651 963 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GLB1LQ6UWU2 654 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 UNC5AQ6ZN44 842 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 TMEM110Q86TL2 294 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 IPMKQ8NFU5 416 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 PTPRN2Q92932 1015 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GBP5Q96PP8 586 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 RNPEPL1Q9HAU8 725 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 GOLGA2P5Q9HBQ8 144 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 FETUBQ9UGM5 382 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 DNAJC16Q9Y2G8 782 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 FIS1Q9Y3D6 152 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
SNX13-213ENST00000611725 WDR27A2RRH5 827 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SLC15A5A6NIM6 579 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 NVLO15381 856 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 CRCPO75575 148 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SERPINE1P05121 402 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CPA3P15088 417 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 NPR3P17342 541 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PTPN1P18031 435 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 MLH1P40692 756 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 LHX1P48742 406 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 STX1BP61266 288 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 MFSD10Q14728 455 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ZCCHC23Q6ZST2 131 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 KDELC2Q7Z4H8 507 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SGF29Q96ES7 293 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 LRMDAQ9H2I8 198 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 TASP1Q9H6P5 420 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 WDCPQ9H6R7 721 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PTPRHQ9HD43 1115 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 MYH10P35580 1976 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 FAM237BA0A1B0GVD1 139 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 HACD1B0YJ81 288 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 DFFAO00273 331 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SMIM10L2AP0DMW4 78 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 SMIM10L2BP0DMW5 78 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 RGS2P41220 211 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 GPX6P59796 221 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CDH17Q12864 832 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 ITGA9Q13797 1035 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 EFTUD2Q15029 972 aaKnown RBP eCLIP6.56□□□□□ -1.363e-6■■□□□ 13.2
SNX13-213ENST00000611725 SNX17Q15036 470 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 HSP90AA5PQ58FG0 334 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 WLSQ5T9L3 541 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CAPRIN2Q6IMN6 1127 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 STRADAQ7RTN6 431 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 CCDC117Q8IWD4 279 aaPredicted RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 BANPQ8N9N5 519 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 FAM13CQ8NE31 585 aa6.56□□□□□ -1.36
SNX13-213ENST00000611725 PIWIL2Q8TC59 973 aaKnown RBP6.56□□□□□ -1.36
SNX13-213ENST00000611725 P2RY11Q96G91 374 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms