RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SPATA24Q86W54 205 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 NT5DC4Q86YG4 428 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 GPC2Q8N158 579 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 IPMKQ8NFU5 416 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ADAM32Q8TC27 787 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 PTPRN2Q92932 1015 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 CENPKQ9BS16 269 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ARL8BQ9NVJ2 186 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 KCNK4Q9NYG8 393 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 UBP1Q9NZI7 540 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 TCRBV7S3A2A0A539 114 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 PABPN1LA6NDY0 278 aaKnown RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 RECQL4O94761 1208 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 PAX7P23759 505 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ADORA2AP29274 412 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 SLC1A6P48664 564 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ATXN3P54252 364 aaPredicted RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 ARPP19P56211 112 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 MAP3K7CLP57077 242 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 OCRLQ01968 901 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 SLC34A1Q06495 639 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 BTBD8Q5XKL5 378 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 LCLAT1Q6UWP7 414 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 TRIM67Q6ZTA4 783 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 ICA1LQ8NDH6 482 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 KCNK16Q96T55 309 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 EBNA1BP2Q99848 306 aaKnown RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.95□□□□□ -0.98
LIG4-204ENST00000611712 HMGXB4Q9UGU5 601 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 C2CD2Q9Y426 696 aa8.95□□□□□ -0.98
LIG4-204ENST00000611712 DGKIO75912 1065 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 GRK2P25098 689 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 GBE1Q04446 702 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 MED21Q13503 144 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 RAB44Q7Z6P3 723 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 ALYREFQ86V81 257 aaKnown RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 NIPA2Q8N8Q9 360 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SGF29Q96ES7 293 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 ANKRD27Q96NW4 1050 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 TWNKQ96RR1 684 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 LGMNQ99538 433 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 ZNF670Q9BS34 389 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 MEI4A8MW99 385 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 E9PBE3 544 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 MTSS1O43312 755 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 KLHL41O60662 606 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 KRT36O76013 467 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 JCHAINP01591 159 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 GP5P40197 560 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 TKTL1P51854 596 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 TPD52P55327 224 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 TSPY1Q01534 308 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 UGP2Q16851 508 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 TRMT5Q32P41 509 aaKnown RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 THEM5Q8N1Q8 247 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 NAT8LQ8N9F0 302 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 MIEF2Q96C03 454 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 FGD4Q96M96 766 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 MRPL45Q9BRJ2 306 aaKnown RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 ILKAPQ9H0C8 392 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 WDCPQ9H6R7 721 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 VCX3AQ9NNX9 186 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 A0A0A0MRY4 1105 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 E7ENQ6 273 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SERPINE1P05121 402 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 ERVK-10P10266 1014 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 GOT1P17174 413 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 PMLP29590 882 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 GLRBP48167 497 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 GPX6P59796 221 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 CACNB2Q08289 660 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 NAPEPLDQ6IQ20 393 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 PMF1Q6P1K2 205 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 ATPAF2Q8N5M1 289 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
LIG4-204ENST00000611712 SPATA13Q96N96 652 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 EFHD1Q9BUP0 239 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 FZD8Q9H461 694 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 IARS2Q9NSE4 1012 aaKnown RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 VANGL2Q9ULK5 521 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 NFKBIEO00221 500 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 USP2O75604 605 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 ZCCHC18P0CG32 403 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 TPH1P17752 444 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 ABCG1P45844 678 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SERPINB8P50452 374 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 MBTD1Q05BQ5 628 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 MPP3Q13368 585 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 HSP90AA5PQ58FG0 334 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 DLK2Q6UY11 383 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 KYAT3Q6YP21 454 aaKnown RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 UNC5AQ6ZN44 842 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 LRRC74BQ6ZQY2 392 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 BANPQ8N9N5 519 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 CMASQ8NFW8 434 aaPredicted RBP8.94□□□□□ -0.98
LIG4-204ENST00000611712 DNAJB3Q8WWF6 145 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 USP6NLQ92738 828 aa8.94□□□□□ -0.98
LIG4-204ENST00000611712 SERAC1Q96JX3 654 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms