RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 GPRIN1Q7Z2K8 1008 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 CAND1Q86VP6 1230 aaKnown RBP14.1□□□□□ -0.15
NEK3-205ENST00000610828 NETO2Q8NC67 525 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 SLC7A14Q8TBB6 771 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 ADAM32Q8TC27 787 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 DENND1AQ8TEH3 1009 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 RNF139Q8WU17 664 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 DCAKDQ8WVC6 231 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 TFB1MQ8WVM0 346 aaKnown RBP14.1□□□□□ -0.15
NEK3-205ENST00000610828 CCT6BQ92526 530 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 SLC2A13Q96QE2 648 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 LGMNQ99538 433 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 PIGVQ9NUD9 493 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 TMEM30AQ9NV96 361 aa14.1□□□□□ -0.15
NEK3-205ENST00000610828 CCT8L1PA6NM43 557 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 TYROBPO43914 113 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 MFSD11O43934 449 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 TOMM70O94826 608 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 CCND3P30281 292 aaPredicted RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 FOXN2P32314 431 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 RPL9P32969 192 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 C4orf22Q6V702 233 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 CTU1Q7Z7A3 348 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 RPAINQ86UA6 219 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 PSTKQ8IV42 348 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 HTR3CQ8WXA8 447 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 RCOR3Q9P2K3 495 aaPredicted RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 CDH9Q9ULB4 789 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 USP15Q9Y4E8 981 aaPredicted RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 H3BRJ5 948 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 GOLGA8RI6L899 631 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 DNM1LO00429 736 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 SPAG6O75602 509 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 B3GAT3O94766 335 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 FBXO21O94952 628 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 RPLP2P05387 115 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 USP17L7P0C7H9 530 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 TAC1P20366 129 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 MAGEA6P43360 314 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 SLC18A1P54219 525 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 DAOAP59103 153 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 ACTN3Q08043 901 aaPredicted RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 PTK7Q13308 1070 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 BZW1Q7L1Q6 419 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 BNIPLQ7Z465 357 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 MRPL10Q7Z7H8 261 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 ZMIZ2Q8NF64 920 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 HASPINQ8TF76 798 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 OLFM3Q96PB7 478 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 RHOBTB2Q9BYZ6 727 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 ZC3H7BQ9UGR2 993 aaKnown RBP14.09□□□□□ -0.15
NEK3-205ENST00000610828 INPP5FQ9Y2H2 1132 aa14.09□□□□□ -0.15
NEK3-205ENST00000610828 F5H423 210 aaPredicted RBP14.08□□□□□ -0.16
NEK3-205ENST00000610828 OAS1P00973 400 aaKnown RBP14.08□□□□□ -0.16
NEK3-205ENST00000610828 FYNP06241 537 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 INHBAP08476 426 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 ODC1P11926 461 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 NCAM1P13591 858 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 PRKAR2AP13861 404 aaKnown RBP14.08□□□□□ -0.16
NEK3-205ENST00000610828 VAV1P15498 845 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 ELNP15502 786 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 PCSK1P29120 753 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 AP1B1Q10567 949 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 SLC1A5Q15758 541 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 DENND5BQ6ZUT9 1274 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 FAM47EQ6ZV65 393 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 SPATA21Q7Z572 469 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 SMARCD1Q96GM5 515 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.16
NEK3-205ENST00000610828 ADAM2Q99965 735 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 KDM4CQ9H3R0 1056 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 ACTR5Q9H9F9 607 aaPredicted RBP14.08□□□□□ -0.16
NEK3-205ENST00000610828 CNGB3Q9NQW8 809 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 NOD1Q9Y239 953 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 DGKIO75912 1065 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 SUN1O94901 812 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 BRCC3P46736 316 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 RAB27AP51159 221 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 DNAJC3Q13217 504 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 HHATQ5VTY9 493 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 TRPM8Q7Z2W7 1104 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 PRPF39Q86UA1 669 aaKnown RBP14.08□□□□□ -0.16
NEK3-205ENST00000610828 CTAGE3PQ8IX95 158 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 MCUQ8NE86 351 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 MZB1Q8WU39 189 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 SLC44A1Q8WWI5 657 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 PITPNM3Q9BZ71 974 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 GRID1Q9ULK0 1009 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 PTCH2Q9Y6C5 1203 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 MAD1L1Q9Y6D9 718 aa14.08□□□□□ -0.16
NEK3-205ENST00000610828 ZNF638Q14966 1978 aaKnown RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 A0A0U1RQF3 1178 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 IQANK1A0A1B0GTG1 560 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 HACD1B0YJ81 288 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 EEF2KO00418 725 aaKnown RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 ZNF623O75123 536 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 CPP00450 1065 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 LPIN1Q14693 890 aa14.07□□□□□ -0.16
NEK3-205ENST00000610828 SEPT7Q16181 437 aaKnown RBP14.07□□□□□ -0.16
NEK3-205ENST00000610828 RAB41Q5JT25 222 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms