RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 LSAMPQ13449 338 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PRKG1Q13976 671 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 CA9Q16790 459 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 ARCQ7LC44 396 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 RTKN2Q8IZC4 609 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 DEFB107AQ8IZN7 70 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PCDH19Q8TAB3 1148 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 NAT14Q8WUY8 206 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 HAPLN3Q96S86 360 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 CCDC28BQ9BUN5 200 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 MRPL4Q9BYD3 311 aaKnown RBP17.49■□□□□ 0.39
TNIP1-220ENST00000610535 CLIC5Q9NZA1 410 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PACSIN3Q9UKS6 424 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 POMPQ9Y244 141 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 E2F8A0AVK6 867 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PGM3O95394 542 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PABPC4LP0CB38 370 aaKnown RBP17.49■□□□□ 0.39
TNIP1-220ENST00000610535 RAG1P15918 1043 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 NCF2P19878 526 aaPredicted RBP17.49■□□□□ 0.39
TNIP1-220ENST00000610535 GPD1P21695 349 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 GPD2P43304 727 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 IDH3AP50213 366 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 FBXL19Q6PCT2 694 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 TMEM192Q8IY95 271 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 KCNN1Q92952 543 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 NMD3Q96D46 503 aaKnown RBP17.49■□□□□ 0.39
TNIP1-220ENST00000610535 CDHR1Q96JP9 859 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 CNPY3Q9BT09 278 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PIH1D1Q9NWS0 290 aaKnown RBP17.49■□□□□ 0.39
TNIP1-220ENST00000610535 SORCS3Q9UPU3 1222 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 KLHL2O95198 593 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 L1CAMP32004 1257 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PTPN11Q06124 597 aaPredicted RBP17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PDK3Q15120 406 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 OR6B2Q6IFH4 312 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 PHTF2Q8N3S3 785 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 OLFM3Q96PB7 478 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 COMMD3-BMI1R4GMX3 469 aa17.49■□□□□ 0.39
TNIP1-220ENST00000610535 APOL1O14791 398 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 TNNC2P02585 160 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 ALDOAP04075 364 aaKnown RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 GRM1Q13255 1194 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 ACAP1Q15027 740 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 LRRC23Q53EV4 343 aaPredicted RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 ZNF667Q5HYK9 610 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 RTP4Q96DX8 246 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 PCYT2Q99447 389 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 NIFKQ9BYG3 293 aaKnown RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 FRMD8Q9BZ67 464 aaPredicted RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 MAGEB5Q9BZ81 275 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 MYOZ2Q9NPC6 264 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 NGRNQ9NPE2 291 aaKnown RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 SIX4Q9UIU6 781 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 SLC4A7Q9Y6M7 1214 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 C2CD4BA6NLJ0 364 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 GABRB2P47870 512 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 PDE1CQ14123 709 aaPredicted RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 GRAMD1BQ3KR37 738 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 PPP6R3Q5H9R7 873 aaPredicted RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 FRMD7Q6ZUT3 714 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 C10orf107Q8IVU9 208 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 RNF149Q8NC42 400 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 TFB1MQ8WVM0 346 aaKnown RBP17.48■□□□□ 0.39
TNIP1-220ENST00000610535 OPTNQ96CV9 577 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 GCNAQ96QF7 691 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 BTBD7Q9P203 1132 aa17.48■□□□□ 0.39
TNIP1-220ENST00000610535 TPP1O14773 563 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ATP5BP06576 529 aaKnown RBP17.47■□□□□ 0.39
TNIP1-220ENST00000610535 CD1EP15812 388 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ITGAXP20702 1163 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 CBLBQ13191 982 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 TBC1D25Q3MII6 688 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 PPM1JQ5JR12 505 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 DLK2Q6UY11 383 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 SPATA24Q86W54 205 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 LRRC71Q8N4P6 559 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ACTRT2Q8TDY3 377 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 APBB2Q92870 758 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 HEXIM2Q96MH2 286 aaKnown RBP17.47■□□□□ 0.39
TNIP1-220ENST00000610535 SORT1Q99523 831 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ZNF214Q9UL59 606 aaPredicted RBP17.47■□□□□ 0.39
TNIP1-220ENST00000610535 CAPN8A6NHC0 703 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ADCY6O43306 1168 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 PRKCBP05771 671 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 HMGB2P26583 209 aaKnown RBP17.47■□□□□ 0.39
TNIP1-220ENST00000610535 MAGEA3P43357 314 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 FOLH1Q04609 750 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 GRM2Q14416 872 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 TMEM132BQ14DG7 1078 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 PCLAFQ15004 111 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 TARBP2Q15633 366 aaKnown RBP17.47■□□□□ 0.39
TNIP1-220ENST00000610535 PDPK2PQ6A1A2 396 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 CASC4Q6P4E1 433 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 FAM183BPQ6ZVS7 135 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ANKRD36BP1Q96IX9 119 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 PCDH18Q9HCL0 1135 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 MAN1C1Q9NR34 630 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 ITGA11Q9UKX5 1188 aa17.47■□□□□ 0.39
TNIP1-220ENST00000610535 PCDHA11Q9Y5I1 949 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms