RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 LINC00482Q8N8I6 264 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 USP38Q8NB14 1042 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TOR1AIP2Q8NFQ8 470 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 OR7D4Q8NG98 312 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 CPT1CQ8TCG5 803 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 SLC22A17Q8WUG5 538 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM120BQ96EK7 910 aaKnown RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 SPATA17Q96L03 361 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 SPATA25Q9BR10 227 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 C11orf84Q9BUA3 381 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 BCAS3Q9H6U6 928 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 GRPEL1Q9HAV7 217 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 BRF2Q9HAW0 419 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 BCO1Q9HAY6 547 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 XAB2Q9HCS7 855 aaKnown RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 HEYLQ9NQ87 328 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 TRPS1Q9UHF7 1281 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 ZFP69BQ9UJL9 534 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 HSF4Q9ULV5 492 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 CA14Q9ULX7 337 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 PA2G4Q9UQ80 394 aaKnown RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 CLCA2Q9UQC9 943 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 DNAJC16Q9Y2G8 782 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 RRP7AQ9Y3A4 280 aaKnown RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 USP15Q9Y4E8 981 aaPredicted RBP4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 USP47Q96K76 1375 aa4.26□□□□□ -1.73
IGHV3-29-201ENST00000604817 FLT1P17948 1338 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 VWA3AA6NCI4 1184 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SUV39H1O43463 412 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 AKAP8O43823 692 aaKnown RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 GPR32O75388 356 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 DNAJB5O75953 348 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SBF1O95248 1867 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 PLA2G1BP04054 148 aaKnown RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TUBB4AP04350 444 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 ITGB3P05106 788 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CLEC3BP05452 202 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 PSMA4P25789 261 aaKnown RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 KLRK1P26718 216 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TM4SF1P30408 202 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 GUCY1A2P33402 732 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 ABCD1P33897 745 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 ARL3P36405 182 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 NNMTP40261 264 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 HADHAP40939 763 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SLC11A2P49281 568 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CTCFP49711 727 aaPredicted RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CALD1Q05682 793 aaKnown RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 NSUN2Q08J23 767 aaKnown RBP eCLIP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 STK4Q13043 487 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CHAF1BQ13112 559 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 MAMLD1Q13495 774 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SMC1AQ14683 1233 aaKnown RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 PLAG1Q6DJT9 500 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 ANO7Q6IWH7 933 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 C10orf71Q711Q0 1435 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 RAB11FIP2Q7L804 512 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CPLX4Q7Z7G2 160 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TTC39CQ8N584 583 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SLC15A4Q8N697 577 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 LILRA3Q8N6C8 439 aaPredicted RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TTC9BQ8N6N2 239 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TEX9Q8N6V9 391 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 KCTD6Q8NC69 237 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 OR5AN1Q8NGI8 311 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CUL5Q93034 780 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SPSB4Q96A44 273 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 C3orf49Q96BT1 292 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 APOPT1Q96IL0 206 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 FEM1CQ96JP0 617 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 EYA3Q99504 573 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 FUZQ9BT04 418 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 EDEM3Q9BZQ6 932 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 C2orf40Q9H1Z8 148 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 PDCL3Q9H2J4 239 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 NELFAQ9H3P2 528 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TRPV4Q9HBA0 871 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 ERVK-5Q9HDB9 667 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 POLR3BQ9NW08 1133 aaPredicted RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SMPD4Q9NXE4 827 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 MTRRQ9UBK8 725 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 SEL1LQ9UBV2 794 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 ZNF215Q9UL58 517 aaPredicted RBP4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TMEM5Q9Y2B1 443 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 TAF1LQ8IZX4 1826 aa4.25□□□□□ -1.73
IGHV3-29-201ENST00000604817 CICQ96RK0 1608 aaPredicted RBP4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 CENPJQ9HC77 1338 aaPredicted RBP4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 OR2W5A6NFC9 320 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 FAM90A20PA6NIJ5 464 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 PTGES3LE9PB15 166 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 C1QTNF3-AMACRE9PGA6 284 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 H0Y626 953 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 STX16-NPEPL1H3BU86 382 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 RTCAO00442 366 aaKnown RBP4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 CHL1O00533 1208 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 SH2B2O14492 632 aaPredicted RBP4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 STX16O14662 325 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 VILLO15195 856 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 FOXN1O15353 648 aa4.24□□□□□ -1.73
IGHV3-29-201ENST00000604817 MTSS1O43312 755 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms