RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 TIE1P35590 1138 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 COPB1P53618 953 aaKnown RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 TBX4P57082 545 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 YWHAZP63104 245 aaKnown RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 KCNMA1Q12791 1236 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SIM2Q14190 667 aaPredicted RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 C10orf76Q5T2E6 689 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 LAIR1Q6GTX8 287 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 PKN3Q6P5Z2 889 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 TOGARAM2Q6ZUX3 1019 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 CEP68Q76N32 757 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 C11orf74Q86VG3 221 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SLC47A2Q86VL8 602 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 ZNF677Q86XU0 584 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 PHTF2Q8N3S3 785 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SUMF1Q8NBK3 374 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 C1orf131Q8NDD1 294 aaKnown RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 DDI1Q8WTU0 396 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 UCMAQ8WVF2 138 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 EZH1Q92800 747 aaPredicted RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 PCMTD1Q96MG8 357 aaPredicted RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SPAG5Q96R06 1193 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 NAA15Q9BXJ9 866 aaKnown RBP12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SLC12A6Q9UHW9 1150 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 STOML2Q9UJZ1 356 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 TLR6Q9Y2C9 796 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 SLC27A6Q9Y2P4 619 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 STARD13Q9Y3M8 1113 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 FHOD1Q9Y613 1164 aa12.04□□□□□ -0.48
CCDC12-209ENST00000604164 PIEZO1Q92508 2521 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 F8VZ95 297 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 PAPSS1O43252 624 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 TIMM44O43615 452 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 HSF2BPO75031 334 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 RPP40O75818 363 aaKnown RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 KLF8O95600 359 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 IGLV3-27P01718 113 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 APOEP02649 317 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 CYP11B1P15538 503 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 GBP1P32455 592 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 KIR2DL1P43626 348 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 TPM4P67936 248 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 CDK17Q00537 523 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 UBXN1Q04323 297 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 BYSLQ13895 437 aaKnown RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 CRY1Q16526 586 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 FILIP1LQ4L180 1135 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 USP39Q53GS9 565 aaKnown RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 MPP7Q5T2T1 576 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 PRR23BQ6ZRT6 265 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 CCDC117Q8IWD4 279 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 ZNF513Q8N8E2 541 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 IL17RCQ8NAC3 791 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 NEK11Q8NG66 645 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 CLEC4CQ8WTT0 213 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 GAB3Q8WWW8 586 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 TMA16Q96EY4 203 aaKnown RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 HHIPQ96QV1 700 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 ACP6Q9NPH0 428 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
CCDC12-209ENST00000604164 RRN3Q9NYV6 651 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 FBXO10Q9UK96 956 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 FANCMQ8IYD8 2048 aa12.03□□□□□ -0.48
CCDC12-209ENST00000604164 GFRA2O00451 464 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 MSI1O43347 362 aaKnown RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 FOXD2O60548 495 aaPredicted RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 CAVIN2O95810 425 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 CCDC172P0C7W6 258 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ZNF18P17022 549 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 NTSR1P30989 418 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 STAT1P42224 750 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 POLR2FP61218 127 aaKnown RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ARID5AQ03989 594 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 EIF4HQ15056 248 aaKnown RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ANO6Q4KMQ2 910 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 FYB2Q5VWT5 728 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 CACNA2D4Q7Z3S7 1137 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ANKS1BQ7Z6G8 1248 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 PASD1Q8IV76 773 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 CCDC33Q8N5R6 958 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ALLCQ8N6M5 410 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 AOPEPQ8N6M6 819 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 TXNDC5Q8NBS9 432 aaKnown RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 DQX1Q8TE96 717 aaKnown RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 BHMTQ93088 406 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 ERGIC2Q96RQ1 377 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 CPXM1Q96SM3 734 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 C2orf42Q9NWW7 574 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 PLK2Q9NYY3 685 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 CYTH4Q9UIA0 394 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 AJAP1Q9UKB5 411 aaPredicted RBP12.02□□□□□ -0.49
CCDC12-209ENST00000604164 NAALADL1Q9UQQ1 740 aa12.02□□□□□ -0.49
CCDC12-209ENST00000604164 HRO43593 1189 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 ACSL4O60488 711 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 LRP3O75074 770 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 FYNP06241 537 aa12.01□□□□□ -0.49
CCDC12-209ENST00000604164 RETP07949 1114 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms