RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 ZBTB24O43167 697 aaPredicted RBP18.91■□□□□ 0.62
CCDC12-208ENST00000603885 MED7O43513 233 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 LTFP02788 710 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 P2RY2P41231 377 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 WASP42768 502 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
CCDC12-208ENST00000603885 CREB5Q02930 508 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 BYSLQ13895 437 aaKnown RBP18.91■□□□□ 0.62
CCDC12-208ENST00000603885 SF3A2Q15428 464 aaKnown RBP18.91■□□□□ 0.62
CCDC12-208ENST00000603885 PLA2G2CQ5R387 149 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 MSANTD2Q6P1R3 559 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 IRF2BP1Q8IU81 584 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 DDI1Q8WTU0 396 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 P2RY11Q96G91 374 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 ACOX2Q99424 681 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 NUP62CLQ9H1M0 184 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 VPS45Q9NRW7 570 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 DACH1Q9UI36 760 aa18.91■□□□□ 0.62
CCDC12-208ENST00000603885 GTPBP10A4D1E9 387 aaKnown RBP18.9■□□□□ 0.62
CCDC12-208ENST00000603885 MSI1O43347 362 aaKnown RBP18.9■□□□□ 0.62
CCDC12-208ENST00000603885 LETM1O95202 739 aaPredicted RBP18.9■□□□□ 0.62
CCDC12-208ENST00000603885 LATS1O95835 1130 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 SLC9A1P19634 815 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 BCKDHBP21953 392 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 GPD2P43304 727 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 ZNF445P59923 1031 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 MEA1Q16626 185 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 EXOC3L4Q17RC7 722 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 FAM114A1Q8IWE2 563 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 ABCA7Q8IZY2 2146 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 CLEC4CQ8WTT0 213 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 RLN3Q8WXF3 142 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 MIS12Q9H081 205 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 THAP9Q9H5L6 903 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 ST7Q9NRC1 585 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 APEX2Q9UBZ4 518 aa18.9■□□□□ 0.62
CCDC12-208ENST00000603885 A0A1W2PQF6 199 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 BCLAF3A2AJT9 711 aaKnown RBP18.89■□□□□ 0.61
CCDC12-208ENST00000603885 GFRA2O00451 464 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 SLC30A4O14863 429 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 MAP3K13O43283 966 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 SART1O43290 800 aaKnown RBP18.89■□□□□ 0.61
CCDC12-208ENST00000603885 THAP12O43422 761 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 GDF9O60383 454 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 GNA15P30679 374 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 ACADSBP45954 432 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 DPCR1Q3MIW9 517 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 MPPE1Q53F39 396 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 DENND1BQ6P3S1 775 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 GJB7Q6PEY0 223 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 ANKS1BQ7Z6G8 1248 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 UCMAQ8WVF2 138 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 GABRG3Q99928 467 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 SLC2A11Q9BYW1 496 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 CACNA2D2Q9NY47 1150 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 STOML2Q9UJZ1 356 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 THADAQ6YHU6 1953 aa18.89■□□□□ 0.61
CCDC12-208ENST00000603885 NPC1O15118 1278 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 CAVIN2O95810 425 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 NCAM1P13591 858 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 GABRG2P18507 467 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 ERCC5P28715 1186 aaPredicted RBP18.88■□□□□ 0.61
CCDC12-208ENST00000603885 USP8P40818 1118 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 RPL34P49207 117 aaKnown RBP18.88■□□□□ 0.61
CCDC12-208ENST00000603885 DHPSP49366 369 aaPredicted RBP18.88■□□□□ 0.61
CCDC12-208ENST00000603885 E2F5Q15329 346 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 MAN2A1Q16706 1144 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 ARHGAP44Q17R89 818 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 GEN1Q17RS7 908 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 MAP7D1Q3KQU3 841 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 ADGRF1Q5T601 910 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 NUGGCQ68CJ6 796 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 CLEC17AQ6ZS10 378 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 LPCAT2Q7L5N7 544 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 CYP2U1Q7Z449 544 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 IPO4Q8TEX9 1081 aaKnown RBP18.88■□□□□ 0.61
CCDC12-208ENST00000603885 STK32AQ8WU08 396 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 ZNF606Q8WXB4 792 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 PIWIL1Q96J94 861 aaKnown RBP18.88■□□□□ 0.61
CCDC12-208ENST00000603885 SMOC1Q9H4F8 434 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 CALCOCO1Q9P1Z2 691 aa18.88■□□□□ 0.61
CCDC12-208ENST00000603885 DCDC2BA2VCK2 349 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 TSPAN3O60637 253 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 IGLV3-27P01718 113 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 PON1P27169 355 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 LIMK1P53667 647 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 RING1Q06587 406 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 UNC45BQ8IWX7 931 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 SCUBE3Q8IX30 993 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 FAM149B1Q96BN6 582 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 TRIM62Q9BVG3 475 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 CD248Q9HCU0 757 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 ACP6Q9NPH0 428 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 CLEC4EQ9ULY5 219 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 PLXND1Q9Y4D7 1925 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 RAD54BQ9Y620 910 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 LAMA1P25391 3075 aa18.87■□□□□ 0.61
CCDC12-208ENST00000603885 MED19A0JLT2 244 aaPredicted RBP18.86■□□□□ 0.61
CCDC12-208ENST00000603885 BECN2A8MW95 431 aa18.86■□□□□ 0.61
CCDC12-208ENST00000603885 HOXD9P28356 352 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms