RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 MTRF1LQ9UGC7 380 aaKnown RBP5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 VAV3Q9UKW4 847 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 COQ6Q9Y2Z9 468 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TSC22D4Q9Y3Q8 395 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 PCDHA9Q9Y5H5 950 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 HEY1Q9Y5J3 304 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TECPR2O15040 1411 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 RIMS2Q9UQ26 1411 aa5.21□□□□□ -1.58
SPTBN1-206ENST00000602898 TCRBV16S1A1N1A0A5B0 115 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 KANSL1LA0AUZ9 987 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CFAP73A6NFT4 308 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 GPR89AB7ZAQ6 455 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 HAT1O14929 419 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 EXTL3O43909 919 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 VEGFDO43915 354 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 SYNCRIPO60506 623 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 LILRB5O75023 590 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 SCAF4O95104 1147 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 YEATS4O95619 227 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CRTAMO95727 393 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 AFPP02771 609 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 S100A9P06702 114 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 GPR89BP0CG08 455 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CYP2C9P11712 490 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CDK4P11802 303 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CPA3P15088 417 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 PRKACBP22694 351 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 HMGB2P26583 209 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 THPOP40225 353 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CETN2P41208 172 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 SLC35G1Q2M3R5 365 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 ARHGAP15Q53QZ3 475 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 MPP7Q5T2T1 576 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 IL23RQ5VWK5 629 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 OR52E8Q6IFG1 317 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 DENND5AQ6IQ26 1287 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 AAGABQ6PD74 315 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 PHLDB2Q86SQ0 1253 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 DPP9Q86TI2 863 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 FAM83AQ86UY5 434 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 DENND1CQ8IV53 801 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CMTR1Q8N1G2 835 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 RBBP8NLQ8NC74 664 aaPredicted RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF473Q8WTR7 871 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 BCL7CQ8WUZ0 217 aaPredicted RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 C7orf43Q8WVR3 580 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 EFHD2Q96C19 240 aaPredicted RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 SYT15Q9BQS2 421 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 APOL6Q9BWW8 343 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 MRPL4Q9BYD3 311 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 MLXIPQ9HAP2 919 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CHMP2BQ9UQN3 213 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 PCDHA11Q9Y5I1 949 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 POMT1Q9Y6A1 747 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 NHSQ6T4R5 1651 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 KIF28PB7ZC32 967 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 E7EVH7 732 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 KMOO15229 486 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 ADAM20O43506 726 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 TBC1D4O60343 1298 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 EXOC3O60645 756 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 GCATO75600 419 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 FGF18O76093 207 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 ASLP04424 464 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 GSTA1P08263 222 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 NCF1P14598 390 aaPredicted RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 POU2F1P14859 743 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 PTPN2P17706 415 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 C5AR1P21730 350 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 JAK1P23458 1154 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 TKTP29401 623 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 IGFALSP35858 605 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 EIF2DP41214 584 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 AFMP43652 599 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 CDK8P49336 464 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 HPCAP84074 193 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 ZNF543Q08ER8 600 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 RPA4Q13156 261 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 IFI16Q16666 785 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 GNASQ5JWF2 1037 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 BROXQ5VW32 411 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 RBM43Q6ZSC3 357 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 BNIPLQ7Z465 357 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 VPS36Q86VN1 386 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 SGMS1Q86VZ5 419 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 MIER2Q8N344 545 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 TTC16Q8NEE8 873 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 LRTOMTQ8WZ04 291 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 GFM2Q969S9 779 aaKnown RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 MED30Q96HR3 178 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 SUSD3Q96L08 255 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 PNKPQ96T60 521 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 ATP6V0BQ99437 205 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 TXN2Q99757 166 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 TIPINQ9BVW5 301 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 KLHL4Q9C0H6 718 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 STMN4Q9H169 189 aaPredicted RBP5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 EVA1AQ9H8M9 152 aa5.2□□□□□ -1.58
SPTBN1-206ENST00000602898 BRF2Q9HAW0 419 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms