RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 HMBSP08397 361 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 COL4A2P08572 1712 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 KRT3P12035 628 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 CHKAP35790 457 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 FLT3P36888 993 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 SLC18A3Q16572 532 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 PPP1R15BQ5SWA1 713 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 ALKBH5Q6P6C2 394 aaKnown RBP14.45□□□□□ -0.1
RNF40-212ENST00000602784 RHBDF2Q6PJF5 856 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 FAM217AQ8IXS0 508 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 SIX5Q8N196 739 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 FCRL2Q96LA5 508 aaPredicted RBP14.45□□□□□ -0.1
RNF40-212ENST00000602784 PANX2Q96RD6 677 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 NELL2Q99435 816 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 C1QTNF1Q9BXJ1 281 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 IRX2Q9BZI1 471 aaPredicted RBP14.45□□□□□ -0.1
RNF40-212ENST00000602784 PARVAQ9NVD7 372 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.45□□□□□ -0.1
RNF40-212ENST00000602784 AGO1Q9UL18 857 aaKnown RBP14.45□□□□□ -0.1
RNF40-212ENST00000602784 CA14Q9ULX7 337 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 NENFQ9UMX5 172 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 PIAS3Q9Y6X2 628 aa14.45□□□□□ -0.1
RNF40-212ENST00000602784 FAM170AA1A519 330 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 C2CD4BA6NLJ0 364 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 GPR37L1O60883 481 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 ENDOD1O94919 500 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 CYP17A1P05093 508 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 RRM1P23921 792 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 RFC1P35251 1148 aaPredicted RBP14.44□□□□□ -0.1
RNF40-212ENST00000602784 PTPN9P43378 593 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 SLC11A2P49281 568 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 PITX1P78337 314 aaPredicted RBP14.44□□□□□ -0.1
RNF40-212ENST00000602784 MAMLD1Q13495 774 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 PPP2R5DQ14738 602 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 DHCR24Q15392 516 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 ADGRF1Q5T601 910 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 IER5LQ5T953 404 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 PLEKHA7Q6IQ23 1121 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 DNAJC24Q6P3W2 148 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 ZNF852Q6ZMS4 543 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 BNIPLQ7Z465 357 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 DENND1CQ8IV53 801 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 CPXM2Q8N436 756 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 ADAM32Q8TC27 787 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 CCDC42Q96M95 316 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 CHP1Q99653 195 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 SELENOOQ9BVL4 669 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 FAM204AQ9H8W3 233 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 NHEJ1Q9H9Q4 299 aaPredicted RBP14.44□□□□□ -0.1
RNF40-212ENST00000602784 SPHK2Q9NRA0 654 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 METTL5Q9NRN9 209 aaKnown RBP14.44□□□□□ -0.1
RNF40-212ENST00000602784 DDIT4Q9NX09 232 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 PAXBP1Q9Y5B6 917 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 TICRRQ7Z2Z1 1910 aa14.44□□□□□ -0.1
RNF40-212ENST00000602784 ANKRD62A6NC57 917 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 SHISA7A6NL88 538 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 KCNU1A8MYU2 1149 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 SPECC1L-ADORA2AF8WAN1 911 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 M0QYT0 321 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
RNF40-212ENST00000602784 HOXC11O43248 304 aaPredicted RBP14.43□□□□□ -0.1
RNF40-212ENST00000602784 PDGFRAP16234 1089 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 FECHP22830 423 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 SDC4P31431 198 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 CCR1P32246 355 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 CTHP32929 405 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 GJA4P35212 333 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 CXCR3P49682 368 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 CCDC122Q5T0U0 273 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 TRNP1Q6NT89 227 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 TPRG1Q6ZUI0 275 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 PHLDB2Q86SQ0 1253 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 EXOC4Q96A65 974 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 BTN2A3PQ96KV6 586 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 DDX50Q9BQ39 737 aaKnown RBP14.43□□□□□ -0.1
RNF40-212ENST00000602784 OSBPL6Q9BZF3 934 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 DEF6Q9H4E7 631 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 MARK1Q9P0L2 795 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 SLC12A6Q9UHW9 1150 aa14.43□□□□□ -0.1
RNF40-212ENST00000602784 MRPS17Q9Y2R5 130 aaKnown RBP14.43□□□□□ -0.1
RNF40-212ENST00000602784 KANSL1LA0AUZ9 987 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 GOLGA6L3A6NEY3 463 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 GFRA2O00451 464 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 AKR1B10O60218 316 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 ACSL4O60488 711 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 APOEP02649 317 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 ADH5P11766 374 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 EIF2DP41214 584 aaKnown RBP14.42□□□□□ -0.1
RNF40-212ENST00000602784 SULT1E1P49888 294 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 CLCN5P51795 746 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 ZNF143P52747 638 aaPredicted RBP14.42□□□□□ -0.1
RNF40-212ENST00000602784 GAD2Q05329 585 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 CCDC14Q49A88 953 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 ZC3H12AQ5D1E8 599 aaKnown RBP14.42□□□□□ -0.1
RNF40-212ENST00000602784 BRMS1LQ5PSV4 323 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 LY6G5CQ5SRR4 150 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 OTUD1Q5VV17 481 aaPredicted RBP14.42□□□□□ -0.1
RNF40-212ENST00000602784 SND1Q7KZF4 910 aaKnown RBP eCLIP14.42□□□□□ -0.1
RNF40-212ENST00000602784 STRADAQ7RTN6 431 aa14.42□□□□□ -0.1
RNF40-212ENST00000602784 TMEM25Q86YD3 366 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms