RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 KRT7P08729 469 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 CDKN2BP42772 138 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 CORO7P57737 925 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 GNGT1P63211 74 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 DEUP1Q05D60 604 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 KAZNQ674X7 775 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 PLVAPQ9BX97 442 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 OSBPL8Q9BZF1 889 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 DDX47Q9H0S4 455 aaKnown RBP18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 NKX2-4Q9H2Z4 354 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 FBXO44Q9H4M3 255 aa18.03■□□□□ 0.48
PPFIA3-207ENST00000602716 hCG_1818297A0A087WSY0 165 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 PRRG1O14668 218 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 IGLV3-25P01717 112 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 KDELR1P24390 212 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 HSPA9P38646 679 aaKnown RBP18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 TUFMP49411 452 aaKnown RBP18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 KLF1Q13351 362 aaPredicted RBP18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 BTBD8Q5XKL5 378 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 GPR65Q8IYL9 337 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 PRELID2Q8N945 189 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 TTLL2Q9BWV7 592 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 DDX56Q9NY93 547 aaKnown RBP18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 PCDHA11Q9Y5I1 949 aa18.02■□□□□ 0.48
PPFIA3-207ENST00000602716 GREB1Q4ZG55 1949 aa18.02■□□□□ 0.47
PPFIA3-207ENST00000602716 A6NNZ2 444 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 FSCN2O14926 492 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 TBX18O95935 607 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 ECHS1P30084 290 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 PLD1Q13393 1074 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 TUBB8Q3ZCM7 444 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 LILRA6Q6PI73 481 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 TCEAL8Q8IYN2 117 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 SH2D3CQ8N5H7 860 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 CMASQ8NFW8 434 aaPredicted RBP18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 ATG4AQ8WYN0 398 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 RBM41Q96IZ5 413 aaKnown RBP18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 MTMR10Q9NXD2 777 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 AP4E1Q9UPM8 1137 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 RWDD3Q9Y3V2 267 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 EPOPA6NHQ4 379 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 RTN3O95197 1032 aaPredicted RBP18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 CDH6P55285 790 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 CUL1Q13616 776 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 DPYSL3Q14195 570 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 EMC10Q5UCC4 262 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 MON1AQ86VX9 555 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 RCOR2Q8IZ40 523 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 MRPL43Q8N983 215 aaKnown RBP18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 TGS1Q96RS0 853 aaKnown RBP18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 KCTD15Q96SI1 283 aaPredicted RBP18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 PCDH18Q9HCL0 1135 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 ABCC13Q9NSE7 274 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 FBXW11Q9UKB1 542 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 SNX10Q9Y5X0 201 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 IRAK3Q9Y616 596 aa18.01■□□□□ 0.47
PPFIA3-207ENST00000602716 TNRC18O15417 2968 aaPredicted RBP18■□□□□ 0.47
PPFIA3-207ENST00000602716 IRAK2O43187 625 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 ZDHHC11BP0C7U3 371 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 MAGEA9P43362 315 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 ERVK-21P61565 698 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 CREMQ03060 361 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 EIF4EBP2Q13542 120 aaPredicted RBP18■□□□□ 0.47
PPFIA3-207ENST00000602716 TTC27Q6P3X3 843 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 KDM7AQ6ZMT4 941 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 TEKT4Q8WW24 435 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 HAUS1Q96CS2 278 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 PGAP3Q96FM1 320 aaPredicted RBP18■□□□□ 0.47
PPFIA3-207ENST00000602716 CALN1Q9BXU9 219 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 SMOC2Q9H3U7 446 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 DHX35Q9H5Z1 703 aaKnown RBP18■□□□□ 0.47
PPFIA3-207ENST00000602716 CCSER2Q9H7U1 834 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 ZNF334Q9HCZ1 680 aaPredicted RBP18■□□□□ 0.47
PPFIA3-207ENST00000602716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18■□□□□ 0.47
PPFIA3-207ENST00000602716 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 STK39Q9UEW8 545 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 FZD10Q9ULW2 581 aa18■□□□□ 0.47
PPFIA3-207ENST00000602716 NRG2O14511 850 aaPredicted RBP17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 ADH1AP07327 375 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 IL4RP24394 825 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 CCT5P48643 541 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 DYNLT1P63172 113 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 TAZQ16635 292 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 KCTD16Q68DU8 428 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 BEND5Q7L4P6 421 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 KCTD6Q8NC69 237 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 C1orf54Q8WWF1 131 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 CCDC188H7C350 402 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 RARGP13631 454 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 KLRC2P26717 231 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 ELF1P32519 619 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 ALDH1A3P47895 512 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 PPP6R3Q5H9R7 873 aaPredicted RBP17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 ERMARDQ5T6L9 678 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 BCAS4Q8TDM0 211 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 MICAL1Q8TDZ2 1067 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 GDPD5Q8WTR4 605 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 SSX2IPQ9Y2D8 614 aa17.99■□□□□ 0.47
PPFIA3-207ENST00000602716 FAM72CH0Y354 149 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms