RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 NUDT5Q9UKK9 219 aa18.68■□□□□ 0.58
VRK3-225ENST00000601912 R3HDM2Q9Y2K5 976 aaKnown RBP18.68■□□□□ 0.58
VRK3-225ENST00000601912 GREB1Q4ZG55 1949 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 ZNF638Q14966 1978 aaKnown RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 FAM187AA6NFU0 413 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 C2orf71A6NGG8 1288 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 H3BRJ5 948 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 HEXIM1O94992 359 aaKnown RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 ZFXP17010 805 aaPredicted RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 IL4RP24394 825 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 EIF4EBP2Q13542 120 aaPredicted RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 SNX1Q13596 522 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 C10orf120Q5SQS8 335 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 WDR93Q6P2C0 686 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 IFT20Q8IY31 132 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 ATG4AQ8WYN0 398 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 FAF2Q96CS3 445 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 TRMT2BQ96GJ1 504 aaKnown RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 PRDM16Q9HAZ2 1276 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 MTMR10Q9NXD2 777 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 UXTQ9UBK9 157 aaPredicted RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 DMGDHQ9UI17 866 aaKnown RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 RAB21Q9UL25 225 aa18.67■□□□□ 0.58
VRK3-225ENST00000601912 UTP11Q9Y3A2 253 aaKnown RBP18.67■□□□□ 0.58
VRK3-225ENST00000601912 APOC4-APOC2K7ER74 178 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 APOL1O14791 398 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 TTI1O43156 1089 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 GLUD1P00367 558 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 APOC2P02655 101 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 SPATA31D3P0C874 917 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 SLC2A3P11169 496 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 HMGA1P17096 107 aaKnown RBP18.66■□□□□ 0.58
VRK3-225ENST00000601912 PPP3CCP48454 512 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ZNF135P52742 658 aaPredicted RBP18.66■□□□□ 0.58
VRK3-225ENST00000601912 LMNB2Q03252 620 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 PPP2R5DQ14738 602 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 TTC27Q6P3X3 843 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 DRICH1Q6PGQ1 229 aaPredicted RBP18.66■□□□□ 0.58
VRK3-225ENST00000601912 LILRA6Q6PI73 481 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 SPATA31D4Q6ZUB0 917 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ZNF276Q8N554 614 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ATL2Q8NHH9 583 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 RAB17Q9H0T7 212 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 TRPM5Q9NZQ8 1165 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 TLR6Q9Y2C9 796 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ASB3Q9Y575 518 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ECEL1O95672 775 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 DNAJB1P25685 340 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 GUCY2DQ02846 1103 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 EFEMP1Q12805 493 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 NNTQ13423 1086 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 SNX30Q5VWJ9 437 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 PDE12Q6L8Q7 609 aaKnown RBP18.66■□□□□ 0.58
VRK3-225ENST00000601912 DNAJB7Q7Z6W7 309 aaPredicted RBP18.66■□□□□ 0.58
VRK3-225ENST00000601912 PYROXD2Q8N2H3 581 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ANKRD7Q92527 254 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 P3H4Q92791 437 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 SLCO2A1Q92959 643 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 PSMG2Q969U7 264 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 HAUS1Q96CS2 278 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 CSPG4P5Q96PW8 444 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 PLEKHA4Q9H4M7 779 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 TMPRSS4Q9NRS4 437 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 ARHGEF38Q9NXL2 777 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
VRK3-225ENST00000601912 MARCH2Q9P0N8 246 aa18.66■□□□□ 0.58
VRK3-225ENST00000601912 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.65■□□□□ 0.58
VRK3-225ENST00000601912 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.65■□□□□ 0.58
VRK3-225ENST00000601912 HIDE1A8MVS5 230 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 MSI1O43347 362 aaKnown RBP18.65■□□□□ 0.58
VRK3-225ENST00000601912 LIASO43766 372 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 CREB3O43889 395 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 TLR5O60602 858 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 ARHGEF15O94989 841 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 CSPG5O95196 566 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 LRG1P02750 347 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 TGM2P21980 687 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 KCNJ1P48048 391 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 KPNA1P52294 538 aaPredicted RBP18.65■□□□□ 0.58
VRK3-225ENST00000601912 ERVK-21P61565 698 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 VSNL1P62760 191 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 BYSLQ13895 437 aaKnown RBP18.65■□□□□ 0.58
VRK3-225ENST00000601912 BRD3Q15059 726 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 JAMLQ86YT9 394 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 KREMEN2Q8NCW0 462 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 PCDH19Q8TAB3 1148 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 CCDC114Q96M63 670 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 HAPLN3Q96S86 360 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 EPB41L5Q9HCM4 733 aa18.65■□□□□ 0.58
VRK3-225ENST00000601912 ZNF840PA6NDX5 716 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 EEF2KO00418 725 aaKnown RBP18.64■□□□□ 0.57
VRK3-225ENST00000601912 GRM6O15303 877 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 DAPK3O43293 454 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 ERLIN1O75477 346 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 ZMYND10O75800 440 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 GAS8O95995 478 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 GOT1P17174 413 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 PTGIRP43119 386 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 TBX4P57082 545 aa18.64■□□□□ 0.57
VRK3-225ENST00000601912 OTUD4Q01804 1114 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms