RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 FAM217AQ8IXS0 508 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 NAT16Q8N8M0 369 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 CCDC26Q8TAB7 109 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 EZH1Q92800 747 aaPredicted RBP17.56■□□□□ 0.4
TRIM28-215ENST00000601150 C18orf8Q96DM3 657 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 XPO6Q96QU8 1125 aaKnown RBP17.56■□□□□ 0.4
TRIM28-215ENST00000601150 TSPY26PQ9H489 355 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 ARHGEF4Q9NR80 690 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 DEC1Q9P2X7 70 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 MYO6Q9UM54 1294 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 TLR6Q9Y2C9 796 aa17.56■□□□□ 0.4
TRIM28-215ENST00000601150 CACNA1HO95180 2353 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 CHURC1-FNTBB4DL54 471 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 ATG13O75143 517 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 KAT7O95251 611 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 CYBBP04839 570 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 FERP16591 822 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 PLA2G5P39877 138 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 GRIA2P42262 883 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 UBASH3AP57075 661 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 KDSRQ06136 332 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 ZNF528Q3MIS6 628 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 DCAF6Q58WW2 860 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 LRSAM1Q6UWE0 723 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 SLC26A9Q7LBE3 791 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 TAC4Q86UU9 113 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 DEFB106AQ8N104 65 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 ZNF397Q8NF99 534 aaPredicted RBP17.55■□□□□ 0.4
TRIM28-215ENST00000601150 ADAM32Q8TC27 787 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 CPA5Q8WXQ8 436 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 SLC2A13Q96QE2 648 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 FAM86C1Q9NVL1 165 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 STOML2Q9UJZ1 356 aa17.55■□□□□ 0.4
TRIM28-215ENST00000601150 A0A0A0MRY4 1105 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 K7EQS6 105 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 TRUB2O95900 331 aaKnown RBP17.54■□□□□ 0.4
TRIM28-215ENST00000601150 CYP1A1P04798 512 aaPredicted RBP17.54■□□□□ 0.4
TRIM28-215ENST00000601150 SCNN1AP37088 669 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 SLC11A2P49281 568 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 ZNF445P59923 1031 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 CDK17Q00537 523 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 SATB1Q01826 763 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 MESP2Q0VG99 397 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 ADGRF1Q5T601 910 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 GRAMD4Q6IC98 578 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 PKN3Q6P5Z2 889 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 PHTF2Q8N3S3 785 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 BAP1Q92560 729 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 BHMTQ93088 406 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 AZIN2Q96A70 460 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 SLC39A13Q96H72 371 aa17.54■□□□□ 0.4
TRIM28-215ENST00000601150 FCRL2Q96LA5 508 aaPredicted RBP17.54■□□□□ 0.4
TRIM28-215ENST00000601150 DNAJC17Q9NVM6 304 aaKnown RBP17.54■□□□□ 0.4
TRIM28-215ENST00000601150 IRAK2O43187 625 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 ACSL4O60488 711 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 DAB1O75553 588 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 GRAP2O75791 330 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 PAPSS2O95340 614 aaPredicted RBP17.53■□□□□ 0.4
TRIM28-215ENST00000601150 PENKP01210 267 aaPredicted RBP17.53■□□□□ 0.4
TRIM28-215ENST00000601150 IGLV3-25P01717 112 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 TNFRSF4P43489 277 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 FYB2Q5VWT5 728 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 TSSK4Q6SA08 328 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 NUDT18Q6ZVK8 323 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 XYLT1Q86Y38 959 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 RPLP0P6Q8NHW5 317 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 EDEM3Q9BZQ6 932 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 FAM204AQ9H8W3 233 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 PLK2Q9NYY3 685 aa17.53■□□□□ 0.4
TRIM28-215ENST00000601150 FAM170AA1A519 330 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 TBC1D3BA6NDS4 549 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 APOEP02649 317 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 MMP8P22894 467 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 GBP1P32455 592 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 NOS2P35228 1153 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 MATKP42679 507 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 DGKGP49619 791 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 SEC13P55735 322 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 PITX1P78337 314 aaPredicted RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 MRPS21P82921 87 aaKnown RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 MPPE1Q53F39 396 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 C2CD6Q53TS8 623 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 FIGNQ5HY92 759 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 FAM102AQ5T9C2 384 aaPredicted RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 IRF2BP2Q7Z5L9 587 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 SFTPA1Q8IWL2 248 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 TERB1Q8NA31 727 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 USP33Q8TEY7 942 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 DDI1Q8WTU0 396 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 ACDQ96AP0 544 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 PCDHB18PQ96TA0 734 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 AGPAT1Q99943 283 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 DDX50Q9BQ39 737 aaKnown RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 NUP58Q9BVL2 599 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 FAM126AQ9BYI3 521 aaPredicted RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 IRX2Q9BZI1 471 aaPredicted RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 TTYH3Q9C0H2 523 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 SEPT11Q9NVA2 429 aaKnown RBP17.52■□□□□ 0.4
TRIM28-215ENST00000601150 DDIT4Q9NX09 232 aa17.52■□□□□ 0.4
TRIM28-215ENST00000601150 RRN3Q9NYV6 651 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms