RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 SMARCE1Q969G3 411 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 PLD4Q96BZ4 506 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 ERLEC1Q96DZ1 483 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 PIWIL1Q96J94 861 aaKnown RBP17.79■□□□□ 0.44
SCAF1-204ENST00000601038 TIGD1Q96MW7 591 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 ULBP1Q9BZM6 244 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 LRRC4Q9HBW1 653 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 OLA1Q9NTK5 396 aaKnown RBP17.79■□□□□ 0.44
SCAF1-204ENST00000601038 THAP10Q9P2Z0 257 aaPredicted RBP17.79■□□□□ 0.44
SCAF1-204ENST00000601038 HOOK1Q9UJC3 728 aaKnown RBP17.79■□□□□ 0.44
SCAF1-204ENST00000601038 KIAA1257Q9ULG3 409 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 CYP8B1Q9UNU6 501 aa17.79■□□□□ 0.44
SCAF1-204ENST00000601038 TRIM49BA6NDI0 452 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 VDRP11473 427 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 CD19P15391 556 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 TBXAS1P24557 533 aaPredicted RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 MAPK8P45983 427 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 GFPT1Q06210 699 aaPredicted RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 ZNF252P-AS1Q0IIN9 211 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 ENPP2Q13822 863 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 STARD3Q14849 445 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 TRIP4Q15650 581 aaPredicted RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 GEN1Q17RS7 908 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 BHLHA9Q7RTU4 235 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 METTL3Q86U44 580 aaKnown RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 UBR7Q8N806 425 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 NDRG1Q92597 394 aaKnown RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 ERCC4Q92889 916 aaPredicted RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 ZNF419Q96HQ0 510 aaPredicted RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 SLC2A11Q9BYW1 496 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 SLC6A17Q9H1V8 727 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 CAPN10Q9HC96 672 aa17.78■□□□□ 0.44
SCAF1-204ENST00000601038 METTL14Q9HCE5 456 aaKnown RBP17.78■□□□□ 0.44
SCAF1-204ENST00000601038 PMM2O15305 246 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 TIMM44O43615 452 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 NDUFS2O75306 463 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 HARS2P49590 506 aaKnown RBP17.77■□□□□ 0.44
SCAF1-204ENST00000601038 ADIGQ0VDE8 80 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 EIF4HQ15056 248 aaKnown RBP17.77■□□□□ 0.44
SCAF1-204ENST00000601038 FUT11Q495W5 492 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 BSPRYQ5W0U4 402 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 KIAA1324Q6UXG2 1013 aaKnown RBP17.77■□□□□ 0.44
SCAF1-204ENST00000601038 ANKS1BQ7Z6G8 1248 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 SCML4Q8N228 414 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 TRIML1Q8N9V2 468 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 UBA3Q8TBC4 463 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 DDI1Q8WTU0 396 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 KCTD13Q8WZ19 329 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 DHTKD1Q96HY7 919 aaPredicted RBP17.77■□□□□ 0.44
SCAF1-204ENST00000601038 HSPA12BQ96MM6 686 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 ELOVL2Q9NXB9 296 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 CLEC4EQ9ULY5 219 aa17.77■□□□□ 0.44
SCAF1-204ENST00000601038 HBS1LQ9Y450 684 aaKnown RBP17.77■□□□□ 0.44
SCAF1-204ENST00000601038 MAP1BP46821 2468 aaKnown RBP17.77■□□□□ 0.43
SCAF1-204ENST00000601038 LAMA1P25391 3075 aa17.77■□□□□ 0.43
SCAF1-204ENST00000601038 PCNX2A6NKB5 2137 aa17.77■□□□□ 0.43
SCAF1-204ENST00000601038 UPK3BL1B0FP48 263 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 UPK3BL2E5RIL1 263 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 O00370 1275 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 PSMA7O14818 248 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 SETSIPP0DME0 302 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 IL12RB1P42701 662 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 FMO5P49326 533 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 ATXN3P54252 364 aaPredicted RBP17.76■□□□□ 0.43
SCAF1-204ENST00000601038 NUCB2P80303 420 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 LRMPQ12912 555 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 STIM1Q13586 685 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 PKDCCQ504Y2 493 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 SYCP2LQ5T4T6 812 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 LCLAT1Q6UWP7 414 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 FMNL3Q8IVF7 1028 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 ELOA2Q8IYF1 753 aaPredicted RBP17.76■□□□□ 0.43
SCAF1-204ENST00000601038 SIX6OS1Q8N1H7 587 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 DEFB124Q8NES8 71 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 FOXJ1Q92949 421 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 CEP63Q96MT8 703 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 MKRN2Q9H000 416 aaKnown RBP17.76■□□□□ 0.43
SCAF1-204ENST00000601038 SLC32A1Q9H598 525 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 PRDM16Q9HAZ2 1276 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 CD93Q9NPY3 652 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 CNGB3Q9NQW8 809 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 ITM2CQ9NQX7 267 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 SFMBT1Q9UHJ3 866 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 WASF3Q9UPY6 502 aa17.76■□□□□ 0.43
SCAF1-204ENST00000601038 YJEFN3A6XGL0 299 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 E7ENQ6 273 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 ARHGAP33O14559 1287 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 SYNCRIPO60506 623 aaKnown RBP17.75■□□□□ 0.43
SCAF1-204ENST00000601038 PAEPP09466 180 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 CD6P30203 668 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 PPP1R2P41236 205 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 ZNF445P59923 1031 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 FOXC1Q12948 553 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 SEMA3BQ13214 749 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 ZNF234Q14588 700 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 MPPE1Q53F39 396 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 HDDC3Q8N4P3 179 aa17.75■□□□□ 0.43
SCAF1-204ENST00000601038 RBBP8NLQ8NC74 664 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms