RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	TMEM215	Q68D42	235 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	KIAA1211L	Q6NV74	962 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	TRIM65	Q6PJ69	517 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	MLKL	Q8NB16	471 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	PLD4	Q96BZ4	506 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	XPO6	Q96QU8	1125 aa	Known RBP	13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	CRACR2A	Q9BSW2	395 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	DCLK3	Q9C098	648 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	ABCC13	Q9NSE7	274 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	LMBRD1	Q9NUN5	540 aa		13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	HBS1L	Q9Y450	684 aa	Known RBP	13.35	□□□□□ -0.27
FKRP-223	ENST00000600872	BCLAF3	A2AJT9	711 aa	Known RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	WASH3P	C4AMC7	463 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	SLC30A4	O14863	429 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	TM4SF5	O14894	197 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	MSI1	O43347	362 aa	Known RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	PON1	P27169	355 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	HOXD9	P28356	352 aa	Predicted RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	NTSR1	P30989	418 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	CHKA	P35790	457 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	MPL	P40238	635 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	MEA1	Q16626	185 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	PREPL	Q4J6C6	727 aa	Predicted RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	USP39	Q53GS9	565 aa	Known RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	MIIP	Q5JXC2	388 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	DENND1B	Q6P3S1	775 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	DGLUCY	Q7Z3D6	616 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	RLN3	Q8WXF3	142 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	IRGQ	Q8WZA9	623 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	IPO9	Q96P70	1041 aa	Known RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	SLC4A5	Q9BY07	1137 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	OLA1	Q9NTK5	396 aa	Known RBP	13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	STRIP2	Q9ULQ0	834 aa		13.34	□□□□□ -0.27
FKRP-223	ENST00000600872	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	TCRBV21S2A2	A0A5A6	115 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	GTPBP10	A4D1E9	387 aa	Known RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	FGFR1OP	O95684	399 aa	Known RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	LTF	P02788	710 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	WAS	P42768	502 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	SGSH	P51688	502 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	LIMK1	P53667	647 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	FAM133B	Q5BKY9	247 aa	Known RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	TCEAL6	Q6IPX3	200 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	RSRC2	Q7L4I2	434 aa	Known RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	SIX6OS1	Q8N1H7	587 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	WDTC1	Q8N5D0	677 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	NETO1	Q8TDF5	533 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	ZNF606	Q8WXB4	792 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	SHC3	Q92529	594 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	TCEAL3	Q969E4	200 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	RTKN	Q9BST9	563 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	POLM	Q9NP87	494 aa	Predicted RBP	13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	APEX2	Q9UBZ4	518 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	TJP2	Q9UDY2	1190 aa		13.33	□□□□□ -0.28
FKRP-223	ENST00000600872	ASCC3	Q8N3C0	2202 aa	Known RBP	13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	DCDC2B	A2VCK2	349 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	PAPSS1	O43252	624 aa	Predicted RBP	13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	ALDH1A2	O94788	518 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	RHOBTB1	O94844	696 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	LATS1	O95835	1130 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	HOXB2	P14652	356 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	ENOSF1	Q7L5Y1	443 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	TRMT11	Q7Z4G4	463 aa	Known RBP	13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	TMEM110	Q86TL2	294 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	SCUBE3	Q8IX30	993 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	IPO4	Q8TEX9	1081 aa	Known RBP	13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	STK32A	Q8WU08	396 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	RNF139	Q8WU17	664 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	HMGB4	Q8WW32	186 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	MYEOV	Q96EZ4	313 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	SLC39A13	Q96H72	371 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	CD93	Q9NPY3	652 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	CACNA2D2	Q9NY47	1150 aa		13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	THAP10	Q9P2Z0	257 aa	Predicted RBP	13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	CDV3	Q9UKY7	258 aa	Known RBP	13.32	□□□□□ -0.28
FKRP-223	ENST00000600872	CACNA1E	Q15878	2313 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	NUMA1	Q14980	2115 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	FBXO21	O94952	628 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	LETM1	O95202	739 aa	Predicted RBP	13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	C7	P10643	843 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	NDUFV2	P19404	249 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	SDHB	P21912	280 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	HLA-F	P30511	346 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	SLC6A4	P31645	630 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	IL12RB1	P42701	662 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	PTGER3	P43115	390 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	RING1	Q06587	406 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	KCNMA1	Q12791	1236 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	ELF2	Q15723	593 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	EXOC3L4	Q17RC7	722 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	ADGRF1	Q5T601	910 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	SYPL2	Q5VXT5	272 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	SMYD5	Q6GMV2	418 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	NADSYN1	Q6IA69	706 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	GBP6	Q6ZN66	633 aa		13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	RBM43	Q6ZSC3	357 aa	Known RBP	13.31	□□□□□ -0.28
FKRP-223	ENST00000600872	NUDT18	Q6ZVK8	323 aa		13.31	□□□□□ -0.28

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