RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 FCRL2Q96LA5 508 aaPredicted RBP13.17□□□□□ -0.3
CHMP2A-206ENST00000600118 TSGA10Q9BZW7 698 aa13.17□□□□□ -0.3
CHMP2A-206ENST00000600118 EYSQ5T1H1 3165 aa13.17□□□□□ -0.3
CHMP2A-206ENST00000600118 XIRP2A4UGR9 3374 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 ANAPC1Q9H1A4 1944 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 KCNU1A8MYU2 1149 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 LEFTY2O00292 366 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 KLKB1P03952 638 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 MAN1A1P33908 653 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 VIPR2P41587 438 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 KCNQ1P51787 676 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 TBX4P57082 545 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 DEUP1Q05D60 604 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 HTR4Q13639 388 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 PPP2R5DQ14738 602 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 CDO1Q16878 200 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 ZC3H12AQ5D1E8 599 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 TANGO2Q6ICL3 276 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 Q6ZNB5 142 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 DDX42Q86XP3 938 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 REXO1L1PQ8IX06 675 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 RNF10Q8N5U6 811 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 TDRD5Q8NAT2 981 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 TPCN2Q8NHX9 752 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 ATXN2LQ8WWM7 1075 aaKnown RBP13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 E2F7Q96AV8 911 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 KCND1Q9NSA2 647 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 NR2E1Q9Y466 385 aa13.16□□□□□ -0.3
CHMP2A-206ENST00000600118 DENND4CQ5VZ89 1909 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 I6L893 689 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 BUB1O43683 1085 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 KRT86O43790 486 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 BUB1BO60566 1050 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 LRCH4O75427 683 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 ECI2O75521 394 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 SLC2A3P11169 496 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 CCR1P32246 355 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 PCK1P35558 622 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 NME3Q13232 169 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 BRMS1LQ5PSV4 323 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 NUGGCQ68CJ6 796 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 C11orf63Q6NUN7 778 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 PARM1Q6UWI2 310 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 HTR3DQ70Z44 454 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 LRRC57Q8N9N7 239 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 FGF14Q92915 247 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 AZIN2Q96A70 460 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 NTAN1Q96AB6 310 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 RPGRIP1Q96KN7 1286 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 ARHGEF38Q9NXL2 777 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 PRKAG3Q9UGI9 489 aa13.15□□□□□ -0.3
CHMP2A-206ENST00000600118 SYNJ2BP-COX16A0A087WUM0 186 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 E2F8A0AVK6 867 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 MACROD2A1Z1Q3 448 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 HEPACAM2A8MVW5 462 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 ZSCAN12O43309 604 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 RNF8O76064 485 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 LATS1O95835 1130 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 HMBSP08397 361 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 BMP1P13497 986 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 DESP17661 470 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 SP100P23497 879 aaPredicted RBP13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 MIPP30301 263 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 ZP2Q05996 745 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 FCHO2Q0JRZ9 810 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 MESDQ14696 234 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 VITQ6UXI7 678 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 MTSS1LQ765P7 747 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 SLFN11Q7Z7L1 901 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 FAM131BQ86XD5 332 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 ADHFE1Q8IWW8 467 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 UNC45BQ8IWX7 931 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 CCAR2Q8N163 923 aaKnown RBP13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 PEBP4Q96S96 227 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 RPP25Q9BUL9 199 aaKnown RBP13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 PLA2G2FQ9BZM2 168 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 DCLK3Q9C098 648 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 WDCPQ9H6R7 721 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 COX16Q9P0S2 106 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 STOML2Q9UJZ1 356 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 PAXBP1Q9Y5B6 917 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 ALG6Q9Y672 507 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 NUMBLQ9Y6R0 609 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 DOCK8Q8NF50 2099 aa13.14□□□□□ -0.31
CHMP2A-206ENST00000600118 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms