RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 HTR3DQ70Z44 454 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 NOP9Q86U38 636 aaKnown RBP12.61□□□□□ -0.39
ZNF548-209ENST00000598895 C12orf40Q86WS4 652 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 TMEM25Q86YD3 366 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 FMNL3Q8IVF7 1028 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 C1orf210Q8IVY1 113 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 CD101Q93033 1021 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 BHMTQ93088 406 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 FAM149B1Q96BN6 582 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 SPAG5Q96R06 1193 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
ZNF548-209ENST00000598895 PHOX2BQ99453 314 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 STK33Q9BYT3 514 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 KCNH6Q9H252 994 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 ABCC13Q9NSE7 274 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 STRIP2Q9ULQ0 834 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 PCDHGC3Q9UN70 934 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 MYOFQ9NZM1 2061 aa12.61□□□□□ -0.39
ZNF548-209ENST00000598895 ANTXRLA6NF34 631 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 TRDMT1O14717 391 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 PAPSS1O43252 624 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 LAMTOR5O43504 91 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 FBXO21O94952 628 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 ADH1CP00326 375 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 KLKB1P03952 638 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CORO1AP31146 461 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 OPRD1P41143 372 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 ACADSBP45954 432 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 RPS9P46781 194 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 NUBP1P53384 320 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 ADKP55263 362 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 SEC13P55735 322 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 BPIFB4P59827 614 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 COG7P83436 770 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CSTF1Q05048 431 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 GRSF1Q12849 480 aaKnown RBP eCLIP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CCINQ13939 588 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 GAS6Q14393 721 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 TMEM196Q5HYL7 178 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 PKN3Q6P5Z2 889 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 DENND1CQ8IV53 801 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 SCML4Q8N228 414 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 TXLNBQ8N3L3 684 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 ZNF276Q8N554 614 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 SLC20A1Q8WUM9 679 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 IRGQQ8WZA9 623 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 EZH1Q92800 747 aaPredicted RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 PIWIL1Q96J94 861 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CPXM1Q96SM3 734 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CHRDQ9H2X0 955 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 SPHK2Q9NRA0 654 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 OLA1Q9NTK5 396 aaKnown RBP12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CDC23Q9UJX2 597 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 NAALADL1Q9UQQ1 740 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 ADGRG1Q9Y653 693 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 ZDBF2Q9HCK1 2354 aa12.6□□□□□ -0.39
ZNF548-209ENST00000598895 CTAGE9A4FU28 777 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 LRRC10BA6NIK2 292 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 NEDD8-MDP1E9PL57 170 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 RNF40O75150 1001 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 GRAP2O75791 330 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 ERBB2P04626 1255 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 FYNP06241 537 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 MMEP08473 750 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 NCAM1P13591 858 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 HOXC13P31276 330 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 SOX5P35711 763 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 RPL34P49207 117 aaKnown RBP12.59□□□□□ -0.39
ZNF548-209ENST00000598895 ARID5AQ03989 594 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 GAD2Q05329 585 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 MESP2Q0VG99 397 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 TAF5Q15542 800 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 MEA1Q16626 185 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 WHAMMP3Q1A5X7 153 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 C2CD6Q53TS8 623 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 DGKKQ5KSL6 1271 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 OR6B2Q6IFH4 312 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 Q6ZNB5 142 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 FAM183BPQ6ZVS7 135 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 SFTPA1Q8IWL2 248 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 MAML2Q8IZL2 1156 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-209ENST00000598895 LRRN4CLQ8ND94 238 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 ADAM32Q8TC27 787 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 STK32AQ8WU08 396 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 HNRNPLLQ8WVV9 542 aaKnown RBP12.59□□□□□ -0.39
ZNF548-209ENST00000598895 OTUB2Q96DC9 234 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 FAM122AQ96E09 287 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 ERGIC2Q96RQ1 377 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 BBS2Q9BXC9 721 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 POLR3BQ9NW08 1133 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-209ENST00000598895 C2orf42Q9NWW7 574 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 PLK2Q9NYY3 685 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 AGO1Q9UL18 857 aaKnown RBP12.59□□□□□ -0.39
ZNF548-209ENST00000598895 CEP83Q9Y592 693 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 KIAA1549LQ6ZVL6 1849 aa12.59□□□□□ -0.39
ZNF548-209ENST00000598895 CAPN9O14815 690 aa12.58□□□□□ -0.4
ZNF548-209ENST00000598895 TRIM24O15164 1050 aa12.58□□□□□ -0.4
ZNF548-209ENST00000598895 TSPAN3O60637 253 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms