RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 TRIM5Q9C035 493 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 SPHK2Q9NRA0 654 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 ADAM22Q9P0K1 906 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 ARHGAP20Q9P2F6 1191 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 SIT1Q9Y3P8 196 aa14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.81□□□□□ -0.04
SHKBP1-217ENST00000598558 MAN2B1O00754 1011 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 IRAK2O43187 625 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 CCDC172P0C7W6 258 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 HNRNPH3P31942 346 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 SCNN1AP37088 669 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ZNF75DP51815 510 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ATXN1P54253 815 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ADKP55263 362 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 GAS6Q14393 721 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ARID5BQ14865 1188 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ZC3H12AQ5D1E8 599 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 TMEM196Q5HYL7 178 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 TOGARAM2Q6ZUX3 1019 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ZDHHC17Q8IUH5 632 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 FAM217AQ8IXS0 508 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 MCOLN2Q8IZK6 566 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 NAT16Q8N8M0 369 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 NT5C3BQ969T7 300 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 CLDN23Q96B33 292 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 OTUB2Q96DC9 234 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 NPY6RQ99463 290 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 ANLNQ9NQW6 1124 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 METTL5Q9NRN9 209 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 PLK2Q9NYY3 685 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 RAPGEFL1Q9UHV5 662 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 LSM7Q9UK45 103 aaKnown RBP14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 CLEC4EQ9ULY5 219 aa14.8□□□□□ -0.04
SHKBP1-217ENST00000598558 SYNJ2BP-COX16A0A087WUM0 186 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 I6L893 689 aaPredicted RBP14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 TSPAN3O60637 253 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 TPM3P06753 285 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 ADH5P11766 374 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 HOXC13P31276 330 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 SLC6A4P31645 630 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 NOS2P35228 1153 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 MATKP42679 507 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 NSFP46459 744 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 SGSHP51688 502 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 SNX16P57768 344 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 RING1Q06587 406 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 FAM133BQ5BKY9 247 aaKnown RBP14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 SH3PXD2AQ5TCZ1 1133 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 TICRRQ7Z2Z1 1910 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 TMC6Q7Z403 805 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 BNIPLQ7Z465 357 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 ETFBKMTQ8IXQ9 262 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 PHTF2Q8N3S3 785 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 BHMTQ93088 406 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 IQCDQ96DY2 449 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 TBCBQ99426 244 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 DNAJC7Q99615 494 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 DCLK3Q9C098 648 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 LMAN1LQ9HAT1 526 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 ADAMTS1Q9UHI8 967 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 STOML2Q9UJZ1 356 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 TLR6Q9Y2C9 796 aa14.79□□□□□ -0.04
SHKBP1-217ENST00000598558 HELZP42694 1942 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 A0A087X0T9 212 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 KCNU1A8MYU2 1149 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 HOXC11O43248 304 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 ACSL4O60488 711 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 EGFP01133 1207 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 FTLP02792 175 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 SERPING1P05155 500 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 FAM228BP0C875 321 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 CHRM1P11229 460 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 RRM1P23921 792 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 RFC1P35251 1148 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 GSCP56915 257 aaPredicted RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 CDK17Q00537 523 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 C1QBPQ07021 282 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 NR1H3Q13133 447 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 NNTQ13423 1086 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 CCINQ13939 588 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 ANO4Q32M45 955 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 PPP1R15BQ5SWA1 713 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 ARTNQ5T4W7 220 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 FYB2Q5VWT5 728 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 PKN3Q6P5Z2 889 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 RFWD3Q6PCD5 774 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 SUGP1Q8IWZ8 645 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 OR8K1Q8NGG5 319 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 RXFP2Q8WXD0 754 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 CFAP57Q96MR6 1250 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 SERPINB11Q96P15 392 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 CHP1Q99653 195 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 P2RY13Q9BPV8 354 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 OSBPL6Q9BZF3 934 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 NUCKS1Q9H1E3 243 aaKnown RBP14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 TMPRSS4Q9NRS4 437 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 PIGVQ9NUD9 493 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 POLR3BQ9NW08 1133 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms