RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 GRAP2O75791 330 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 KAT7O95251 611 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 LATS1O95835 1130 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 CHRNB2P17787 502 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 GRIA2P42262 883 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 GABRB2P47870 512 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 SLC6A3Q01959 620 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 ARID5AQ03989 594 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 RING1Q06587 406 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 NNTQ13423 1086 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 PPP2R5DQ14738 602 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 NR1I3Q14994 352 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 ZNF528Q3MIS6 628 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 PREPLQ4J6C6 727 aaPredicted RBP14.43□□□□□ -0.1
UPF1-205ENST00000598209 DCAF6Q58WW2 860 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 NAA35Q5VZE5 725 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 NUGGCQ68CJ6 796 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 TOGARAM2Q6ZUX3 1019 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 ERICH1Q86X53 443 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 ZDHHC17Q8IUH5 632 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 SFTPA1Q8IWL2 248 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 UNC45BQ8IWX7 931 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 FAM217AQ8IXS0 508 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 DEFB106AQ8N104 65 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 PHTF2Q8N3S3 785 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 MSANTD4Q8NCY6 345 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 RPLP0P6Q8NHW5 317 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 CPA5Q8WXQ8 436 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 C18orf8Q96DM3 657 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 FCRL2Q96LA5 508 aaPredicted RBP14.43□□□□□ -0.1
UPF1-205ENST00000598209 SLC2A13Q96QE2 648 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 PHOX2BQ99453 314 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 DNAJC17Q9NVM6 304 aaKnown RBP14.43□□□□□ -0.1
UPF1-205ENST00000598209 C2orf42Q9NWW7 574 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 PLK2Q9NYY3 685 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 TLR6Q9Y2C9 796 aa14.43□□□□□ -0.1
UPF1-205ENST00000598209 CHURC1-FNTBB4DL54 471 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 TRIM24O15164 1050 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 ATG13O75143 517 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 TRUB2O95900 331 aaKnown RBP14.42□□□□□ -0.1
UPF1-205ENST00000598209 PENKP01210 267 aaPredicted RBP14.42□□□□□ -0.1
UPF1-205ENST00000598209 CYP1A1P04798 512 aaPredicted RBP14.42□□□□□ -0.1
UPF1-205ENST00000598209 CYBBP04839 570 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 TDGF1P13385 188 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 NBL1P41271 181 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 SEC13P55735 322 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 UBASH3AP57075 661 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 PITX1P78337 314 aaPredicted RBP14.42□□□□□ -0.1
UPF1-205ENST00000598209 FYB2Q5VWT5 728 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 GRAMD4Q6IC98 578 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 TRIM72Q6ZMU5 477 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 SLC26A9Q7LBE3 791 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 ZNF397Q8NF99 534 aaPredicted RBP14.42□□□□□ -0.1
UPF1-205ENST00000598209 CCDC26Q8TAB7 109 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 USP33Q8TEY7 942 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 BAP1Q92560 729 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 P2RY11Q96G91 374 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 SLC39A13Q96H72 371 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 TSPY26PQ9H489 355 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 STOML2Q9UJZ1 356 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 MYO6Q9UM54 1294 aa14.42□□□□□ -0.1
UPF1-205ENST00000598209 A0A0A0MRY4 1105 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 TBC1D3BA6NDS4 549 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 ANTXRLA6NF34 631 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 IRAK2O43187 625 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 ACSL4O60488 711 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 TSPAN3O60637 253 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 DAB1O75553 588 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 PAPSS2O95340 614 aaPredicted RBP14.41□□□□□ -0.1
UPF1-205ENST00000598209 IGLV3-25P01717 112 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 FERP16591 822 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 TNFRSF4P43489 277 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 SLC11A2P49281 568 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 CDK17Q00537 523 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 C2CD6Q53TS8 623 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 C2orf27AQ580R0 203 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 ADGRF1Q5T601 910 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 LRSAM1Q6UWE0 723 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 XYLT1Q86Y38 959 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 TERB1Q8NA31 727 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 DDI1Q8WTU0 396 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 ACDQ96AP0 544 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 PCDHB18PQ96TA0 734 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 FAM204AQ9H8W3 233 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 R4GN57 208 aa14.41□□□□□ -0.1
UPF1-205ENST00000598209 EML5Q05BV3 1969 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 K7ESF4 209 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 GFRA2O00451 464 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 APOEP02649 317 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 CISD3P0C7P0 127 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 CCDC172P0C7W6 258 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 GBP1P32455 592 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 NOS2P35228 1153 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 TIE1P35590 1138 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 SCNN1AP37088 669 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 DGKGP49619 791 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 ZNF445P59923 1031 aa14.4□□□□□ -0.1
UPF1-205ENST00000598209 RNASE9P60153 205 aaKnown RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 MRPS21P82921 87 aaKnown RBP14.4□□□□□ -0.1
UPF1-205ENST00000598209 MPPE1Q53F39 396 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms