RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 EDEM1Q92611 657 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 WDR6Q9NNW5 1121 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 PCDHB8Q9UN66 801 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 TRIM43BA6NCK2 446 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 A6NNZ2 444 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 FOXO6A8MYZ6 492 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 PITPNM1O00562 1244 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 TCEA3O75764 348 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 ABHD2P08910 425 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 OR4Q2P0C623 313 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 TUBB8Q3ZCM7 444 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 CAPN12Q6ZSI9 719 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 ANKMY2Q8IV38 441 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 PSTKQ8IV42 348 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 THEM5Q8N1Q8 247 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 TRIM43Q96BQ3 446 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 PPP1R12CQ9BZL4 782 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 DMAP1Q9NPF5 467 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 ARHGEF4Q9NR80 690 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 DTLQ9NZJ0 730 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 PRKAG2Q9UGJ0 569 aa17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 XPO7Q9UIA9 1087 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 PRG3Q9Y2Y8 225 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-216ENST00000598201 KIAA0355O15063 1070 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 ZFXP17010 805 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 ARL4AP40617 200 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 MMP13P45452 471 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 OR1G1P47890 313 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 YWHAHQ04917 246 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 CYP4X1Q8N118 509 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 NETO2Q8NC67 525 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 DBF4BQ8NFT6 615 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 URGCPQ8TCY9 931 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 RNF139Q8WU17 664 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 FAM72CH0Y354 149 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 RGS19P49795 217 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 HNRNPH2P55795 449 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 TSPY1Q01534 308 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 KCNJ11Q14654 390 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 TCTN1Q2MV58 587 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 FAM72AQ5TYM5 149 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 PM20D1Q6GTS8 502 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 FAM72DQ6L9T8 149 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 KCNT2Q6UVM3 1135 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 EXOC3L1Q86VI1 746 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 FAM72BQ86X60 149 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 SCAMP5Q8TAC9 235 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 FTHL17Q9BXU8 183 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 NR2E3Q9Y5X4 410 aa17.65■□□□□ 0.42
SHKBP1-216ENST00000598201 CFAP69A5D8W1 941 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 ENPP3O14638 875 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 CREB3O43889 395 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 RAG1P15918 1043 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 CYP2C18P33260 490 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 ADRA1BP35368 520 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 NR2C2P49116 596 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 GATMP50440 423 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 ARL4CP56559 192 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 GPX6P59796 221 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 RNASELQ05823 741 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 STAT4Q14765 748 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 SLC45A4Q5BKX6 768 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 FAXCQ5TGI0 409 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 CCDC110Q8TBZ0 833 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 TTC25Q96NG3 672 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 RAB6BQ9NRW1 208 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 DDIT4Q9NX09 232 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 TMEM161AQ9NX61 479 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 PAK5Q9P286 719 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 RCOR3Q9P2K3 495 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 NLRC5Q86WI3 1866 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 CLUHO75153 1309 aa17.64■□□□□ 0.41
SHKBP1-216ENST00000598201 A0A087WUV0 522 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 E7ESA3 106 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 MFSD11O43934 449 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 TIMP1P01033 207 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 CREB1P16220 341 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 GCAP28676 217 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 SEC24CP53992 1094 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 XRCC4Q13426 336 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 BSPRYQ5W0U4 402 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 CDKL3Q8IVW4 592 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 BCAS4Q8TDM0 211 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 OLFM3Q96PB7 478 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 QKIQ96PU8 341 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 SLC9A7Q96T83 725 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 SELENOSQ9BQE4 189 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 VPS37BQ9H9H4 285 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 EURLQ9NYK6 297 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 FBXW11Q9UKB1 542 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 ZMYND8Q9ULU4 1186 aaPredicted RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 PTPRDP23468 1912 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 TMEM189-UBE2V1I3L0A0 370 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 DGKIO75912 1065 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 ITGB8P26012 769 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 CCL23P55773 120 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 MAPRE1Q15691 268 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
SHKBP1-216ENST00000598201 EFHC2Q5JST6 749 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms