RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 LIMK1P53667 647 aa24.04■■□□□ 1.44
SSBP4-205ENST00000598159 MFAP3P55082 362 aa24.04■■□□□ 1.44
SSBP4-205ENST00000598159 E2F5Q15329 346 aa24.04■■□□□ 1.44
SSBP4-205ENST00000598159 GOLGA1Q92805 767 aa24.04■■□□□ 1.44
SSBP4-205ENST00000598159 MED15Q96RN5 788 aa24.04■■□□□ 1.44
SSBP4-205ENST00000598159 SLC2A11Q9BYW1 496 aa24.04■■□□□ 1.44
SSBP4-205ENST00000598159 NPC1O15118 1278 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 MAP3K13O43283 966 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 MED7O43513 233 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 LATS1O95835 1130 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 KRT5P13647 590 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 BCKDHBP21953 392 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 WASP42768 502 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 ZNF445P59923 1031 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 MPPE1Q53F39 396 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 DDI1Q8WTU0 396 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 RLN3Q8WXF3 142 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 P2RY11Q96G91 374 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 ACOX2Q99424 681 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 GABRG3Q99928 467 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 CLSTN2Q9H4D0 955 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 STOML2Q9UJZ1 356 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 NUP205Q92621 2012 aa24.03■■□□□ 1.44
SSBP4-205ENST00000598159 A0A1W2PQF6 199 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 DCDC2BA2VCK2 349 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 CALCAP01258 141 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 GABRG2P18507 467 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 GPD2P43304 727 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 ACADSBP45954 432 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 RPL34P49207 117 aaKnown RBP24.02■■□□□ 1.44
SSBP4-205ENST00000598159 MEA1Q16626 185 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 TPD52L1Q16890 204 aaPredicted RBP24.02■■□□□ 1.44
SSBP4-205ENST00000598159 MAP7D1Q3KQU3 841 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 SPDYCQ5MJ68 293 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 MSANTD2Q6P1R3 559 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 GBP6Q6ZN66 633 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 LPCAT2Q7L5N7 544 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 IPO4Q8TEX9 1081 aaKnown RBP24.02■■□□□ 1.44
SSBP4-205ENST00000598159 UCMAQ8WVF2 138 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 CRACR2AQ9BSW2 395 aa24.02■■□□□ 1.44
SSBP4-205ENST00000598159 PIK3R2O00459 728 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 LTFP02788 710 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 ADGRF1Q5T601 910 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 SMYD5Q6GMV2 418 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 TRIM65Q6PJ69 517 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 IRF2BP1Q8IU81 584 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 UNC45BQ8IWX7 931 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 STK32AQ8WU08 396 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 ZNF606Q8WXB4 792 aa24.01■■□□□ 1.43
SSBP4-205ENST00000598159 PIWIL1Q96J94 861 aaKnown RBP24.01■■□□□ 1.43
SSBP4-205ENST00000598159 MED19A0JLT2 244 aaPredicted RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 GTPBP10A4D1E9 387 aaKnown RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 SART1O43290 800 aaKnown RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 TIMM44O43615 452 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 SLC9A1P19634 815 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 DHPSP49366 369 aaPredicted RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 EXOC3L4Q17RC7 722 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 DDX1Q92499 740 aaKnown RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 TMA16Q96EY4 203 aaKnown RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 IRX2Q9BZI1 471 aaPredicted RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 MIS12Q9H081 205 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 SMOC1Q9H4F8 434 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 THAP9Q9H5L6 903 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 CD248Q9HCU0 757 aa24■■□□□ 1.43
SSBP4-205ENST00000598159 THAP10Q9P2Z0 257 aaPredicted RBP24■■□□□ 1.43
SSBP4-205ENST00000598159 ZNF217O75362 1048 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 LETM1O95202 739 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-205ENST00000598159 ANP32AP39687 249 aaKnown RBP23.99■■□□□ 1.43
SSBP4-205ENST00000598159 MTIF2P46199 727 aaKnown RBP23.99■■□□□ 1.43
SSBP4-205ENST00000598159 RING1Q06587 406 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 GEN1Q17RS7 908 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 NUGGCQ68CJ6 796 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 IL31Q6EBC2 164 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 SLC36A4Q6YBV0 504 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 CYP2U1Q7Z449 544 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 ANKS1BQ7Z6G8 1248 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 FAM114A1Q8IWE2 563 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 SCUBE3Q8IX30 993 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 CLEC4CQ8WTT0 213 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 AZIN2Q96A70 460 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 ST7Q9NRC1 585 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 ELOVL2Q9NXB9 296 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 CACNA2D2Q9NY47 1150 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 APEX2Q9UBZ4 518 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 DACH1Q9UI36 760 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 MBD1Q9UIS9 605 aaPredicted RBP23.99■■□□□ 1.43
SSBP4-205ENST00000598159 STON1Q9Y6Q2 735 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 PLXND1Q9Y4D7 1925 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 CACNA1AO00555 2505 aa23.99■■□□□ 1.43
SSBP4-205ENST00000598159 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 WASH3PC4AMC7 463 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 MSI1O43347 362 aaKnown RBP23.98■■□□□ 1.43
SSBP4-205ENST00000598159 NCAM1P13591 858 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 ERCC5P28715 1186 aaPredicted RBP23.98■■□□□ 1.43
SSBP4-205ENST00000598159 GNA15P30679 374 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 SLC11A2P49281 568 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 EIF4HQ15056 248 aaKnown RBP23.98■■□□□ 1.43
SSBP4-205ENST00000598159 KIAA1211LQ6NV74 962 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 CLEC17AQ6ZS10 378 aa23.98■■□□□ 1.43
SSBP4-205ENST00000598159 BEND5Q7L4P6 421 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms